4GVB,4GVB,1KP6


Conserved Protein Domain Family
KP6_alpha_beta

?
cd22738: KP6_alpha_beta 
Click on image for an interactive view with Cn3D
KP6 killer toxin subunit alpha/beta family
KP6 is an anti-fungal protein produced by a double-stranded RNA virus. It is a neutral protein that is lethal to sensitive cells of the same or related species. KP6 is composed of two subunits: KP6alpha and KP6beta, which are produced after cleavage from a single precursor preprotoxin. The KP6alpha subunit is responsible for targeting while the KP6beta subunit is cytotoxic. KP6alpha can recognize some cellular receptors before interaction of the complex with KP6beta, precipitating cell death. Neither subunit is homologous in either sequence or structure to any other known cytotoxic protein, however, they have similar structures to each other. The major difference between the two subunits is that KP6alpha contains a hydrophobic helix at the N-terminus, which plays a key role in target recognition.
Links
?
Statistics
?
PSSM-Id: 439305
Aligned: 6 rows
Threshold Bit Score: 90.5286
Created: 13-Oct-2021
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
 
heterodimer
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:4GVB; Ustilago maydis virus P6 KP6 subunits alpha and beta form a heterodimer, contacts at 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          ##      # ##                                         ####          
4GVB_A     15 ECWCTAHGt-GNELRYATAAGCGDHLS-KSYYDARAGHCLFSDD----LRNQFYSHCSSLNN-NMSCRSLSK 79  Ustilago maydis virus P6
4GVB_B      8 MCQCVDTTngGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSwdlfTSGQFYQACLRYSHaGTNCQPDPQ 79  Ustilago maydis virus P6
1KP6_A     15 ECWCTAHGt-GNELRYATAAGCGDHLS-KSYYDARAGHCLFSDD----LRNQFYSHCSSLNN-NMSCRSLSK 79  Ustilago maydis
P16948     42 ECWCTAHGt-GNELRYATAAGCGDHLS-KSYYDARAGHCLFSDD----LRNQFYSHCSSLNN-NMSCRSLSK 106 Ustilago maydis virus P6
P16948    146 MCQCVDTTngGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSwdlfTSGQFYQACLRYSHaGTNCQPDPQ 217 Ustilago maydis virus P6
AAB26392  146 MCQCVDTTngGVRLDAVTRAACSIDSFiDGYYTEKDGFCRAKYSwdlfTSGQFYQACLRYSHaGTNCQPDPQ 217 Ustilago maydis

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap