3VPY,5Z58


Conserved Protein Domain Family
FHA_SNIP1_DDL-like

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cd22676: FHA_SNIP1_DDL-like 
Click on image for an interactive view with Cn3D
forkhead associated (FHA) domain found in Smad nuclear-interacting protein 1 (SNIP1), FHA domain-containing protein DDL, and similar proteins
SNIP1 is an FHA domain-containing protein required for pre-mRNA splicing as a component of the spliceosome. It inhibits NF-kappaB signaling by competing for its binding to the C/H1 domain of CBP/p300 transcriptional co-activators. It is involved in microRNA (miRNA) biogenesis. SNIP1 is a regulator of the cell cycle and cyclin D1 expression and may be involved in cyclin-D1/CCND1 mRNA stability through the SNARP complex which associates with both the 3'end of the CCND1 gene and its mRNA. This family also includes Arabidopsis thaliana FHA domain-containing protein DDL and similar proteins. DDL, also called protein DAWDLE, is involved in the microRNA (miRNA) and short interfering RNA (siRNA) biogenesis. It may facilitate DCL1 to access or recognize primary miRNAs. DDL binds RNA non-specifically. The FHA domain is a small phosphopeptide recognition module.
Statistics
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PSSM-Id: 438728
Aligned: 22 rows
Threshold Bit Score: 139.355
Created: 4-Sep-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:putative phosphopeptide binding site [polypeptide binding site]
Evidence:
  • Comment:GR at the C terminus of strand beta3, SRxH just preceding beta5, and motif SxNG in the beta6-beta7 turn indicate a canonical mode of pThr recognition.
  • Comment:based on structures of other FHA domains with bound phosphopeptide

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            ###                   ## #                  
3VPY_A        17 WRLYVFKdge---------plnEPLCLHRq-SCYLFGRErriad------iptdHPSCSKQHAVIQYRexekekp----- 75  thale cress
XP_652652     64 WRFYCFKgde---------eieHPFVMNNr-SFYIFGTDkenvd------ivlrHPTNEPQHAVVQFRyhn--------- 118 Entamoeba histo...
XP_001349805 449 WRLYMFKdsnn-------nepqKILHIHDk-SYYLIGKEqlavd------iqlnNISISKQHAVIQFKkhe--------- 505 Plasmodium falc...
XP_005825406 488 WRLYEFSagn----------cvRIIDVSSn-SYYLIGREgavrqilgarsvildHHTISGQHAVIQYRsnikrsehmtil 556 Guillardia thet...
OJJ39288      47 WRLYVFKgqd----------llEVMELKEr-SCWLIGRErlvvd------fpldHPSCSKQHAAIQFRfvekrne----- 104 Aspergillus wen...
ODQ74109      63 YRFYVFKdgd----------iaDTLTLDQq-PTYLFGRDrtvad------vpldHPSCSKQHAVLQYRlvveeggm---- 121 Lipomyces stark...
OII73844      46 WRLYVFNninkyp----vdnypSTISIYEk-QTYLIGSNeriad------ieikHPTICDQHAVIQHKykn--------- 105 Cryptosporidium...
VDN43176      14 IALIVWDka------------lPVINIDRh-SAYLIGRDsetad------ivldHPGVWTQHAVIQFCrtmkyin----- 69  Gongylonema pul...
OUS47892      73 WRLYVFKgae---------ecgEPYKLRGskTRYLIGRDrtvad------ipsdHPSCSKQHCVIQFRdvdd-------- 129 Ostreococcus tauri
GBF99927     178 LKFQPPPearrctnprwrlyvgDPLPLDKf-PYFLFGKErrvad------vptdHPSCSRQHAVIVFReveras------ 244 Raphidocelis su...
Feature 1                             # ##                                          
3VPY_A        76 -----dgxxgkqVKPYIXDLgSTNKTYINESPIEp--------qRYYELFeKDTIKFGnssREYVLL 129 thale cress
XP_652652    119 ----------neILPYIIDLnSKEGVYLNKNRIKe--------nVYIELRnGDVLMFGhstREYVLL 167 Entamoeba histolytica HM-1:IMSS
XP_001349805 506 ----------skILPFLLDLnSTNGTYINNEKIQp--------nKYYELReTDIIRFGssnREFVLL 554 Plasmodium falciparum 3D7
XP_005825406 557 rdemqqddkiedGDPYFIDLgSTNGSFLNGMPTEp--------mVFYRLKnADTLRFAlceSEFVLL 615 Guillardia theta CCMP2712
OJJ39288     105 -----fgdrigrVKPYLIDLeSANGSSVNGDKIPa--------gRYVEVRdKDVLQFGlstREYVMM 158 Aspergillus wentii DTO 134E9
ODQ74109     122 -----fgepvdrIAPFIYDLgSANGTQLNGEKVPv--------rEYVELKeKDMVTFGlssREYLLL 175 Lipomyces starkeyi NRRL Y-11557
OII73844     106 ---------ncnPCIYVMDLdSKYGTYINDQKIEs--------rRYYELYeKDSLKFGhfpNEYILL 155 Cryptosporidium andersoni
VDN43176      70 ------hedvefIRPYIIDFgTYNGTYVNRESVRp--------wRRRELNeNDKLQFGnciREFVLR 122 Gongylonema pulchrum
OUS47892     130 ---------grgVTPYAFDLgSANGTFVNKKRIQg--------eTYVRLKsRDVLKFGastRDYVLL 179 Ostreococcus tauri
GBF99927     245 -------slarvVAPYIIDLeTVNGTFVNGERIEasrraicflhAYVELLeRDVVRFGlssREYVLL 304 Raphidocelis subcapitata

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