6WT5,6WT4


Conserved Protein Domain Family
STING_bact-like

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cd22659: STING_bact-like 
Click on image for an interactive view with Cn3D
Stimulator Of Interferon Genes (STING) protein in bacteria
This model represents the bacterial Stimulator Of Interferon Genes (STING) protein that exhibits clear homology to the cyclic-dinucleotide-binding domain of human STING, and represents a newly identified prokaryotic member of the STING family of receptors. Bacterial STING occurs primarily as a fusion to a Toll/interleukin-1 receptor (TIR, or Toll and IL-1 receptor) adaptor domain, or more rarely are appended to predicted transmembrane segments; TIR domains can function as beta-nicotinamide adenine dinucleotide (NAD+) hydrolases in plant and animal immunity. Bacterial STING proteins define a minimal homodimeric scaffold that selectively responds to cyclic di-GMP synthesized by a neighboring cGAS/DncV-like nucleotidyltransferase (CD-NTase) enzyme. They couple the recognition of cyclic dinucleotides with the formation of protein filaments to drive oligomerization of TIR effector domains and rapid NAD+ cleavage. Structures of Flavobacteriaceae sp. STING (FsSTING) and Capnocytophaga granulosa STING (CgSTING) show that the overall architecture is conserved with metazoan STING; they adopt a canonical V-shaped, homodimeric architecture with a hydrophobic alpha-helix stem. However, bacterial STING proteins are 20% smaller and notably compact. Comparative structural analysis shows that metazoan-specific insertions into the core bacterial STING fold have enabled a switch from direct effector function to regulation of antiviral transcription.
Statistics
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PSSM-Id: 439311
Aligned: 80 rows
Threshold Bit Score: 96.1386
Created: 19-Oct-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand bindinghomodimer
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:6WT4: Flavobacteriaceae STING binds 3',3'-cGAMP; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #  ##                                                                  
6WT5_A         9 FPSSTLAAVYYENFIKPTCSHIInngglldkngyiyKKCTIKIIIPKKLTsdvnsqf-----qrikakIETKELSFEYL- 82  Capnocytophaga ...
6WT4_A         6 SPAFALAVGYFKNFIFPAITQIKen---------geVNPKICIYKPKHFDeltstnid--mikaeltnKKYNLSEINLSl 74  Flavobacteriaceae
PZN55233      89 SLPYALAYGYVNNFVEPLISQLLknip------lgsRFPKLFIYIPEKLSeleprnie--riigrirmKNFEDKVIHLEf 160 Bacteroidetes b...
WP_099598272  57 SPAISLAHGYVNNFLEPAINEILlks--------gaSVTSFKIYIPDELDelsdqhidrmkleikskgYQLNEIKLKRKt 128 Reichenbachiell...
OGS77342     156 VASAALALGYFENFVQKLAKKRLed----------dIPFSLKIVLPGNINdihstt------llykrnNPSDEIGVFEKt 219 Candidatus Fluv...
WP_147767155  80 SPSYALALGYVNNFIEPTIVQLIen---------giKQPLLYIYKPTDISelykpnidrtkatiknnsFEINELQLDLKh 150 Seonamhaeicola ...
VVB94437      96 SAPLALAHGYVHNFVEPLVTRLMqqag------ksaEDVRLYILIPDELAdlepaavertiarirakqFATKTVNLQFDq 169 uncultured arch...
TCL10820      78 SPAISLAHGYVNNFLEPAINELLmk---------asNNINFSIYIPHDLEelsdqqidrmklqieangYRLKEIKLKKKt 148 Roseivirga ehre...
WP_143387506  79 SPADALAFGYVNNFLLPAITQLKengevk-pilfiyKPEKISELIPSNIDiikae--------lrnksYSLGEINLAPKs 149 unclassified Fl...
TNE81396     156 MPSAALALGYFDNFIEPFAKRKHen----------nEEFKFQILLPKNIQdvnger------qsyknrNPSTEKGVAGPn 219 Bacteroidetes b...
Feature 1             #  ##               #  ##                                                  
6WT5_A        83 -----GRPRNINVeiiaedgeVXIIDFPTILSGINYAISNLLPqdfns-xsvdYEAILSRELERFVYTLKKIALRDg-fD 155 Capnocytophaga ...
6WT4_A        75 kgaraRDILTLNKks----kiHSYFDFPNTLLSLYSYVDFKIAssnnnsselkKKKFVELLIEQFYLKLNELIQENn-lT 149 Flavobacteriaceae
PZN55233     161 q---eGRARDILTinqq-gnrRVYFDFPNTLLSLNSLIDYKMEsrrnrfsdsiREEIAKEYIDKFRQVMEKLIQSKd-lT 235 Bacteroidetes b...
WP_099598272 129 -----GRPHDLLTvekq-agsLSYFDFPRTLLSLQSYIDYKVEssknesldskKQVLGTKLIKAFKDEVQRLVEKKk-lE 201 Reichenbachiell...
OGS77342     220 -----SRPIINRYrg----atEAYWDIPTTLQTLNKLINMIIPsseig-mnpeKQDWISTELRNFKGTLEVLIELCpasR 289 Candidatus Fluv...
WP_147767155 151 -----GRARDILTiqks-ktkMIYFDFPNTLLSLSAYIDFKIAsrkneadvnrKTELTKVLFDMFYSKVEELLKTKn-lD 223 Seonamhaeicola ...
VVB94437     170 -----GRPRDVLTvmkg-gdkTVYFDFPNTLLTLKPVVDYKVHapadtsleqaKRELGTKFIQRFKKSVEEMLTRKr-lT 242 uncultured arch...
TCL10820     149 -----GRPHDLLLvekq-egtLSYFDFPRTLLSLQSYIDYKVDstknefseekKIAMGAKLVDAFHNEVDRLIKKKn-lE 221 Roseivirga ehre...
WP_143387506 150 -----ARSRDVLTiqkn-pdkQVYFDFPNTLLSLLNYIDYKIEskennsnkseKEELGKKLISEFYKRVNDLAEEKr-iN 222 unclassified Fl...
TNE81396     220 -----TRPVAFELdh----qpNTYWDIPTTLSTMGRLMDLLLPsseig-idieKQDWIDHELRNFAGTIAVLVERSlacN 289 Bacteroidetes b...
Feature 1              
6WT5_A       156 DLIKIV 161 Capnocytophaga granulosa
6WT4_A       150 NNITFC 155 Flavobacteriaceae
PZN55233     236 DYVSFI 241 Bacteroidetes bacterium
WP_099598272 202 KMVTYV 207 Reichenbachiella sp. 5M10
OGS77342     290 GNVSVL 295 Candidatus Fluviicola riflensis
WP_147767155 224 AYVKYC 229 Seonamhaeicola sp. 1505
VVB94437     243 DYVKLT 248 uncultured archaeon
TCL10820     222 GIVTFV 227 Roseivirga ehrenbergii
WP_143387506 223 NNLKYC 228 unclassified Flavobacterium
TNE81396     290 GKIEVF 295 Bacteroidetes bacterium

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