6YPC,5Z08,6NUW,5Z07


Conserved Protein Domain Family
CTF3_NTD_HEAT

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cd22647: CTF3_NTD_HEAT 
Click on image for an interactive view with Cn3D
N-terminal HEAT repeat domain of inner kinetochore subunit CTF3 and similar proteins
CTF3 (also called CENP-I homolog, chromosome loss protein 3, chromosome transmission fidelity protein 3, or constitutive centromere-associated network protein CTF3) is a component of the central kinetochore, which mediates the attachment of the centromere to the mitotic spindle by forming essential interactions between the microtubule-associated outer kinetochore proteins and the centromere-associated inner kinetochore proteins. It is required for establishing bipolar spindle-microtubule attachments and proper chromosome segregation. The kinetochore is a multiprotein complex that assembles on centromeric DNA and attaches chromosomes to spindle microtubules, mediating chromosome segregation and sister chromatid segregation during meiosis and mitosis. CTF3 is a component of the inner kinetochore constitutive centromere-associated network (CCAN), which serves as a structural platform for outer kinetochore assembly. This model corresponds to the N-terminal HEAT repeat domain of CTF3, which interacts with another four kinetochore subunits, WIP1, CNN1, MCM16 and MCM22.
Statistics
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PSSM-Id: 439352
Aligned: 65 rows
Threshold Bit Score: 138.096
Created: 13-Oct-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
pentamer
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:pentamer interface [polypeptide binding site]
Evidence:
  • Structure:YPC; Saccharomyces cerevisiae CTF3 is a component of inner kinetochore, forming a heteropentameric complex with subunits MCM33, MCM16, CNN1 and WIP1; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                  #   # 
6YPC_I         5 LDDIILSLTnanertpPQALKTTLSLLYEKSKQYGLsSPQLQALVRLLCEtsiIDTVTKVYIVENCFLpdgyltKELLLE 84  Saccharomyces c...
SCU88810       4 VDNCLHLLIhah-eldTTQIHEILTKIHASVNREGVsAELLDQFIVFLCEtsrISVSTKIFLVREALLpngkipDSTVHT 82  Lachancea dasie...
CUS20276       4 VDESFRELVgcs-klsPLEISELLSKIHSAVFTEGVsASILNEVIEFLCEsplISTSTKIYLVREALFpngpvqSSTVLT 82  Lachancea quebe...
SCW01798       4 TTSCFIELYqen-elsQSRIQWLLETIYEKAPTEGVtPSHLTDIITFLCEsslLATTTKVYLIEHCLIpndyipSAVIYT 82  Lachancea ferme...
XP_003646918   7 GTEAIQQLLnsnelsdASELRVVLSHVYAKCPTVGIsSNVIPEVIKFLCTsefIAPSTRVYLIEHCLLprgylpTSVVFT 86  Eremothecium cy...
AGO12397       5 ATDPVQRLLscteetgPLQLRSVLSDLYEHAPSYGIsPAKISELIDFLCNaefIALSTRIYIIENCLVpngylsSSAVFD 84  Saccharomycetac...
XP_017986904   5 QHKQIQNLLtyndstdTDILHSTLTQIYAHCPYTGIpTNLIIEIIPFLCNadfISISTRVYIIERCLLprgflpASIVLT 84  Eremothecium si...
SCU77918       4 VDKGFVELTsnd-qldDIAVRAVLNGIEKNVTQEGIsVNILSAVIDFLCEstvLSDNTKLYVIENWLLpnnyygNDVVRS 82  Lachancea miran...
QGN18064       6 AEDCVDFLInyahsasEAELKGCINVLRNTAIADGLnNTVILQLIDFLTTtgaLGEDTKVFLLSHCLVpnelikADCITH 85  Kluyveromyces m...
QEU62886       7 VYECICFLEglendvsERQIKNCIEFLYESATTIGLgCEDIRKLIDCLCItdiIGAETKEFIITRCLVpneyvdAKCITL 86  Kluyveromyces l...
Feature 1          #                                       ##  #  ##  #  ####                   #
6YPC_I        85 IINHLGtptvfsryriqtppvLQSALCKWLVHVYflfpvhseREHNISSSIWLHLWQFSFLQkWITPLVIWQAttpvdVK 164 Saccharomyces c...
SCU88810      83 VIKYLGvtnfstsqkqetprsLQTELCKWLVHVYlym--edvSVFERTYSVWFHLWSLDYLQiWITYLLFWSTsr-ylAK 159 Lachancea dasie...
CUS20276      83 IISHLGvrsftntrkqethrdIQIELCKWLVHVFvlt--ddvNVYLRTYSIWFQLWKFDYLQkWVTYILFWATta-dvVR 159 Lachancea quebe...
SCW01798      83 IIEHLGasslqtmyklqtpeaIQIHLCKWVVHIFfll--edtSVFEKTYSLWFHLWSFDYLQhWITYVLYWSTlk-mhVR 159 Lachancea ferme...
XP_003646918  87 VIRYLGvqtsqnqfktvvppaIQVALCKWLCHVWllip-sgkIVFSRTYTLWFQLWMIDYLQdWITYLLAWATtsplqVT 165 Eremothecium cy...
AGO12397      85 VLKHLGpstpqnpfklivapaLQVALVKWLCHVLaiip-dyqKVLRRTYPIWFQLWMVDYLQdWTTYLLVWGTesrlqVT 163 Saccharomycetac...
XP_017986904  85 VAKRLGiqspqnpykpvtpiaVQVALCKWLCHVYpiiv-danDAFKKTYAIWFQLWMFDYLQdWITYLLLWSTtsrsqIV 163 Eremothecium si...
SCU77918      83 ILKHLGgealptlfklrppktVQVALVKWLVHVYpla--ardEIFRETYEVWFQLWQYDFLQkWISYILVWSTip-dfVK 159 Lachancea miran...
QGN18064      86 ILNKLStptvfvpyktvppprLQVALVKWVCHIYpwv--eetHFFKTSFSIWFELWKLDYLQkWITYIIIWSLde-thIT 162 Kluyveromyces m...
QEU62886      87 IISKLGtptflhpykavpgrrLQVALVRWVCHVYpwv--kdkSIFKDTFSTWFEYWRLDYLQhWITYILLWTFdd-rhIS 163 Kluyveromyces l...
Feature 1        ##   #  #  ######                     #                                      
6YPC_I       165 PWKLSIIKRCAMHPGYRdapGSATLILQRFQCLVGASSQitesiitin-cnrktlksHRNLKLDAHFLSILKRILSR 240 Saccharomyces cere...
SCU88810     160 PWRMKVHISVGNNPGYSnsrATATLLLHKYYNIHRHSSIaraitnlk--cnarrlktIQQSFWDHVFLIKWCFVLEL 234 Lachancea dasiensi...
CUS20276     160 PWRVQWLLKTSLKTGYTnskALATLLLEKFNVAKPSQAIvdaissiq--snrrrlksLEYDLYDDSFLSTWSRVLIH 234 Lachancea quebecensis
SCW01798     160 PWRVKKLALLGFKTGYRnsaALSTLILMRYQSIESQDLIadfitrln--cnarklntLKKGMFDKDFHHLCAGVLES 234 Lachancea fermentati
XP_003646918 166 EYRTHALLKIGENPGYLngrALSAFLLCRYRQLKPIEPVitaidrlk--cnakrlstVERIAFDDEFIENLGKILSN 240 Eremothecium cymba...
AGO12397     164 EYRVTAVQRVGSNPGYRngkPLASLLLHKFQQVKSSRMVehaiaqir--cnakrligVQKVQFGTKFMDALEDVLST 238 Saccharomycetaceae...
XP_017986904 164 GYRVNVLLKFGLHPGYAnsrALATLLLYHYSRLNPTEQVqssinklk--cnakrlasVQNFPIDETFVDNASAVLSQ 238 Eremothecium sinec...
SCU77918     160 PWRVRVVLDIATKSGYTnarALGTLLLRRYDALKSHKLIqeaietin--cnkrrlrtSSNEFINQDFCGSVGSVLDL 234 Lachancea mirantina
QGN18064     163 KWRCKVLLNVGNNVGYAnsrTHATYILGAFASLDSPLQDtihdyisilhgnekrlhkLSEFEHDTELVSNIKTVFDR 239 Kluyveromyces marx...
QEU62886     164 KWRCKVLFNIGNNPGYKnsrAYSVYILDAFLALDTDLRDtisdfiqmlnsnekslqkIASFDYDRQFVLNTRQALST 240 Kluyveromyces lactis

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