6OV6,6OV6,6OV6


Conserved Protein Domain Family
C24-like

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cd22641: C24-like 
Click on image for an interactive view with Cn3D
Bizionia argentinensis C24 protein and similar proteins
C24 is a putative receptor-binding tip-like protein from Bizionia argentinensis JUB59. It may interact with lipopolysaccharide and membrane receptors. The C24 trimer binds a unique Mg2+ ion and shares structural similarity with the bacteriophage T4 long tail fiber receptor-binding tip, which adopts an overall rocket shape. However, there are marked differences in its domain organization, size and sequence identity. The C24 polypeptide chain contains four distinct domains: a globular proximal shoulder domain, a globular collar domain, an elongated, intertwined metal-binding needle domain and a globular receptor-binding-like unique distal head domain. This is a multi-domain model which includes all these four domains of C24 protein.
Links
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Statistics
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PSSM-Id: 439347
Aligned: 304 rows
Threshold Bit Score: 72.9167
Created: 13-Oct-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Mg binding sitetrimer
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: Mg binding site [ion binding site], 2 residue positions
Conserved feature residue pattern:H [NH]Click to see conserved feature residue pattern help
Evidence:
  • Structure:6OV6: Bizionia argentinensis C24 protein trimer binds a Mg2+ ion; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
6OV6_A         9 TGGFPLETDTLNAMQEAYSVFNALGela-----------------------------------------gnKAIIKGCVV 47  Bizionia argent...
WP_146733844 174 DGGFDLRTKDNDSLVVEHFAAGDTSvt-------------------------------------------rLVTITNTGN 210 Minicystis rosea
WP_128690951  72 TAQGAASTATAKASAASDSATAAAGsastattkaseasdsaaaaadsastamtkageasdsataaagsastATTKAGEAS 151 Chromohalobacte...
WP_053405187   8 IGVKKWYGDHLLDMQDELYTLLDTFfsn-----------------------------------------ygAHVVYGCKI 46  Persicobacter s...
RKX34082      35 TSSPPERMTYQGFLVNGNGDALGQDlpksydlvfsiwne------------------qnggeeakwgeqqtVTVDKGYFS 96  Verrucomicrobia...
WP_008099888  47 TGNPLGSSGTAPNFTAAASNYTMEFriydq-------------------------------------qetgTLIYAETQT 89  Verrucomicrobia...
OFY36205       2 TISLSISAQVGIGQTPKPGSILDLTnvnnkylvlpvsi--------------------septpiimtdsaaVLYYNGNVY 61  Bacteroidetes b...
OUV10304      24 ADGPPSLMTYQGHLVDALGQPVGADlptakt-----------------------------------iqfriYTAETGGEV 68  Alphaproteobact...
OFX28802     202 NTKFFVSSSDGTASWDSLRSIITSGt---------------------------------------------GLTWNGNTI 236 Bacteroidetes b...
WP_019572160  92 RQSFYLAQEAFDLTASTLAVANDGSysasfrr--------------------------------itnllypQTDVDAANV 139 unclassified Th...
Feature 1                                                                                        
6OV6_A        48 Sg----------------------sTTTDGVVYIN----------------------------GEVFKFVGGq------- 70  Bizionia argent...
WP_146733844 211 VgigtttpgaplevagmissksggfKFPDGTIQTTsvessva--------------nginlnaNTAIRFADGgvigsgda 276 Minicystis rosea
WP_128690951 152 Ns----------------------aTAAAGSASTAttkageas-------------dsataaaGSASTAQGAa------- 189 Chromohalobacte...
WP_053405187  47 Qdng------------------dswTIGNGLVSLPfngaf-------------------rvcrFETIEIADGe------- 82  Persicobacter s...
RKX34082      97 Vllg-------------------egAAAAGYTNVPl---------------------------SSVFAGDAS-------- 122 Verrucomicrobia...
WP_008099888  90 V------------------------TVSLGNFSVRlg-------------------------sGVPIPNQTPaptqtsla 120 Verrucomicrobia...
OFY36205      62 V------------------------KTSTGIKVYTpwdwdgdnshpisspagapvgigatpgiGDPFRLLVAdapaev-- 115 Bacteroidetes b...
OUV10304      69 Kyaee-----------------qtvTVDKGYFSVLlg-------------------------qGSAIPGEPGpp------ 100 Alphaproteobact...
OFX28802     237 Nsvwtqs-------------gnnifNNNLGNVGIGny------------------------spAEKLDVDGGht------ 273 Bacteroidetes b...
WP_019572160 140 Qyvkdvlts---------skdafeeRVKAETARTEtya-----------------------arDLTLTYRNTanqhrlt- 186 unclassified Th...
Feature 1                                                                                        
6OV6_A        71 ------------------------tQSRVKILETSTSKEFEDGs------tNAVHFERYVTFASGt-------------- 106 Bizionia argent...
WP_146733844 277 -----------------nhqilfrrSENILELREFGDIVLSPGata---gaTTAKVVVKANGNVGigaaspga------- 329 Minicystis rosea
WP_128690951 190 ------------------------sTATTKAGTAADSATAAAGsas---taQGAASTATTKAGAAadsagaa-------- 234 Chromohalobacte...
WP_053405187  83 -------------------------EAYFSVDVRDHLGAYKDGsqk--aiaKEYVAKKVLTPTDAltikkdgthhifdal 135 Persicobacter s...
RKX34082     123 -------------------------SRYIEITVKGIGTPPADLtirprlqlVTSPYAFMATRASAlldg----------- 166 Verrucomicrobia...
WP_008099888 121 nafsgkeryleltviippassgtaiTPRLAFQSSPFSFVAERAkv-----aDSVVGKVTATAGSQft------------- 182 Verrucomicrobia...
OFY36205     116 --------------------tpigsNASIIVGNPNSYHLAIDN--------NEIMAKKDATTAEVlklq----------- 156 Bacteroidetes b...
OUV10304     101 -----------------------ntPFASTIFDGDENGVFDGN--------KSDQRFIGIRVDGIdinprlryva----- 144 Alphaproteobact...
OFX28802     274 -----------------------ilQNSSSDINLYLKTKTSGAy------lSNLFFLNFAGTGYGgisgdqtn------- 317 Bacteroidetes b...
WP_019572160 187 -------------------aeahrdTANQHRLDAAASAVYSDAqa----drAEVEADRSLSEANRa-------------- 229 unclassified Th...
Feature 1                                                                                        
6OV6_A       107 -------------------gSISWAEFAKLTt-----------------------------------LRELSRRLlpa-- 130 Bizionia argent...
WP_146733844 330 ------------plavagivHSTTGGFKFPDdt--------------------------------vqTTALSTAAllp-- 363 Minicystis rosea
WP_128690951 235 --------------aqsaseAAAARDSAQGWae---------------------------------kAEAAATGIpt--- 264 Chromohalobacte...
WP_053405187 136 vqqkayeeakskepafeknsGFNLNKSSAIDsdkedelats-----------------kaikevkeiAEEKESALpa--- 195 Persicobacter s...
RKX34082     167 -----------------dddMVTVSPGSGIN------------------------------------VNGVVTATkfngf 193 Verrucomicrobia...
WP_008099888 183 ------------------gtSSAPTSFVGPVttsgglsgtt-----------------gsfsstvtaTTFVGNGTip--- 224 Verrucomicrobia...
OFY36205     157 ----------------eeegTVEIRTGAATTtn---------------------------------tVLNVNGSVnsvgk 187 Bacteroidetes b...
OUV10304     145 -----------spyavlsqkAVEANRSQTVAtisghka----------------------ddslhadKATLAKAVesikg 191 Alphaproteobact...
OFX28802     318 -------------trvniwmGATPNGNEKLTvlssgnvgigstaptqkldingqikiqggnpapgkvLTSDATGVatwqp 384 Bacteroidetes b...
WP_019572160 230 -------------------eGEADRSRDEADr-----------------------------------AQALADSLesv-- 253 unclassified Th...
Feature 1                                                                                        
6OV6_A       131 ------------------------gtNPQLYSGsv--------nNIPSGWQLCDgtn-------------gteNLKGSFI 165 Bizionia argent...
WP_146733844 364 ------------------------rgLILMWAGal--------aDIPAGWALCDgtq-------------gtpDLRDKFV 398 Minicystis rosea
WP_128690951 265 -------------------------gGVIMWTGas--------nNVPTGWALCDgsn-------------gtpDLRDRFV 298 Chromohalobacte...
WP_053405187 196 -------------------------gAIIMWAGal--------aDIPQGWRLCDgsn-------------gtpDLRGRFV 229 Persicobacter s...
RKX34082     194 g--------------------tiplgGIIMWSGs----------TVPDGWALCNggs-------------gtpDLRDRFI 230 Verrucomicrobia...
WP_008099888 225 ------------------------igGIIMWSGst--------sNIPAGWRLCNgsg-------------gtpNLRDRFI 259 Verrucomicrobia...
OFY36205     188 vren--------------gndllpagSIIMWNGt----------TPPAGWVLCDgqrynssgvvvpsggiltpNLKERFI 243 Bacteroidetes b...
OUV10304     192 hkadsaviadrakvadgvsngsipigGIIMWTKn----------SIPAGWRLCNgsg-------------gtpNLVNRFV 248 Alphaproteobact...
OFX28802     385 ---------------------pvpvgGIIMYSGawyfdatglgtGTLDGWALCDgqg-------------grpDLRDRFV 430 Bacteroidetes b...
WP_019572160 254 -----------------------pggAMVMWPHav--------sLIPAGWVLCDgtn-------------gtpDMRGLFP 289 unclassified Th...
Feature 1                                                                                        
6OV6_A       166 VGYdpnds----dynaiGKVGGTKKVt--------------pSGNLDSRSInvtvprdgwstfgsglgavksgri----- 222 Bizionia argent...
WP_146733844 399 VGAgss--------ysvGATGGADQVtl-------------tVNQMPAHTHvvpgaygtddknfgdggs----------- 446 Minicystis rosea
WP_128690951 299 VGAgaa--------ygvGDTGGANQVql-------------sTSEIPSHSHsmnsagnhshsmdsagnhshsgstnttgy 357 Chromohalobacte...
WP_053405187 230 VGYhsgdt----dynslKKTGGLKSVtl-------------lSTQIPKHTHpltiddnggghshviqgrlrgggsgspni 292 Persicobacter s...
RKX34082     231 VGSggg--------ystGAIGGANTVtl-------------tKNQMPSHNHggstgsksvyqpgsnssvappv------- 282 Verrucomicrobia...
WP_008099888 260 VGAggg--------ygvNATGGASSVtl-------------tTAQMPSHDHdvwtrsgdgkhwhyrsvdnsaphpngdgr 318 Verrucomicrobia...
OFY36205     244 VGYgnnaalpggpynsvGLTGGKDSVtl-------------tTGQMPNHNHpittdgshthsleassseggdgdatiltd 310 Bacteroidetes b...
OUV10304     249 VGAghw--------ygiRGTGGVNSVal-------------hYNHMPAHAHsagahgggnhwhriytrqddwndsgghgp 307 Alphaproteobact...
OFX28802     431 MGAsts--------adlLALGGDSSIti------------nsEAQLPSHSHpfttssggggtfplditsdgnhshpisdp 490 Bacteroidetes b...
WP_019572160 290 VGAggg--------yslGATGGANTKshshgdnfsvdnhtlnNSRIPSHRHqgghvlstsdlagygttsgts-------- 353 unclassified Th...
Feature 1                                                                                       #
6OV6_A       223 --------------------------------------------------vvgsgqqenseyleslrasgidrtLTSTPH 252 Bizionia argent...
WP_146733844 447 ---------------------------------------------------------fatgdtptqnnvnsqstGGNAPH 469 Minicystis rosea
WP_128690951 358 hahgmynvsprgnftgwnntnggrlfdaagsyvesslntqgagnhahslsinsngahthginsngahthginntGGGQAH 437 Chromohalobacte...
WP_053405187 293 hvnss-----------------------------------tdngnwadtisgremlrtnssgfhthtgsvgqqsSGGSSH 337 Persicobacter s...
RKX34082     283 -----------------------------------------------------fikyvsgtryssshshsiasdGSGQAH 309 Verrucomicrobia...
WP_008099888 319 vd-----------------------------------------lstesdnanwnanlnssadgahqhyvdtpkrGSGQAH 357 Verrucomicrobia...
OFY36205     311 ---------------------------------------------dgigsyygwiigddrigyagshthtltatGGGHAH 345 Bacteroidetes b...
OUV10304     308 s-------------------------------------------wgngdnghyrgyhgthwgghhghhiythnaGHGHHH 344 Alphaproteobact...
OFX28802     491 ghshtvndlwvdwqnngtlknf-pdgtdgyqysttettstavtgislqsagqhnhsgstvtlldhphsgttgliGSGSPI 569 Bacteroidetes b...
WP_019572160 354 -----------------------------------------------------rprhtgstsgsrnsypwsnytGNGDAH 380 unclassified Th...
Feature 1         #                          
6OV6_A       253 SHTFtgnqq----dnraPYYTLAYIIYI 276 Bizionia argentinensis JUB59
WP_146733844 470 ENRP-------------PYRAVFFIMKL 484 Minicystis rosea
WP_128690951 438 ENRP-------------PYYALAYIMKV 452 Chromohalobacter salexigens
WP_053405187 338 ENRP-------------PYLVLAYIMKM 352 Persicobacter sp. CCB-QB2
RKX34082     310 ENRP-------------PYYALAFIMRV 324 Verrucomicrobia bacterium
WP_008099888 358 ENRP-------------PYYALAFIMRV 372 Verrucomicrobiae bacterium DG1235
OFY36205     346 ENLP-------------PYYVLAFIMKL 360 Bacteroidetes bacterium GWF2_38_335
OUV10304     345 ENRP-------------PWYAVYYIMRV 359 Alphaproteobacteria bacterium TMED87
OFX28802     570 PYLP-------------PFLKLAYIMRI 584 Bacteroidetes bacterium GWA2_32_17
WP_019572160 381 AHGLsgsvssatidvrpPYRAIHFIMKL 408 unclassified Thioalkalivibrio

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