6WT4,4F5D,6WT5,6A03,6WT6,4EF4,4JC5,4KBY,4QXP,5CFQ,5GRM,6CFF,6WT7,6NT6,4F5W


Conserved Protein Domain Family
STING-like

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cd22587: STING-like 
Click on image for an interactive view with Cn3D
C-terminal domain of metazoan Stimulator Of Interferon Genes (STING) protein, bacterial STING, and similar proteins
This model represents the cytoplasmic ligand-binding domain (LBD, or cyclic-dinucleotide-binding domain) of Stimulator Of Interferon Genes (STING) protein, also called transmembrane protein 173 (TMEM173), mediator of IRF3 activation (MITA), endoplasmic reticulum IFN stimulator (ERIS), or N-terminal methionine-proline-tyrosine-serine plasma membrane tetraspanner (MYSA) of metazoa, as well as STING proteins in bacteria. STING is a receptor that senses foreign cyclic dinucleotides that are released during bacterial infections as well as in endogenous cyclic GMP-AMP (cGAMP) signaling during viral infection and anti-tumor immunity. STING activates downstream transcription factor IRF3 (interferon regulatory factor 3) and STAT (signal transducer and activator of transcription) via TBK1 ((Tank binding kinase 1), which are responsible for antiviral and innate immune response against intracellular pathogens. STING's activation of IRF3 and STAT induces the production of type 1 interferon and target genes involved in immune cell homing such as chemokines, respectively. STING may also function as a direct cytosolic DNA sensor. STING also has a role in B cell adaptive immunity through modulating B cell receptor signaling via PI3K (phosphatidylinositol 3-kinase). STING is encoded by the STING1 gene in mammals. It is an endoplasmic reticulum (ER) membrane protein that contains four transmembrane helices followed by a cytoplasmic ligand-binding and signaling domain. The cytoplasmic domain forms a homodimer, which undergoes conformational changes upon binding to cGAMP. Bacterial STING proteins are functional cyclic dinucleotide receptors and define a minimal homodimeric scaffold that selectively responds to cyclic di-GMP. They couple the recognition of cyclic dinucleotides with the formation of protein filaments to drive oligomerization of TIR effector domains and rapid NAD+ cleavage. Bacterial STING occurs primarily as a fusion to a Toll/interleukin-1 receptor (TIR, or Toll and IL-1 receptor) adaptor domain; TIR domains can function as beta-nicotinamide adenine dinucleotide (NAD+) hydrolases in plant and animal immunity. Bacterial STING homologs are 20% smaller and markedly compact, such that the metazoan insertions into the core bacterial fold are necessary for induction of autophagy, and the C-terminal tail contains motifs for the recruitment of kinases and transcription factors in vertebrates.
Statistics
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PSSM-Id: 439309
Aligned: 107 rows
Threshold Bit Score: 86.9045
Created: 13-Oct-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand bindinghomodimer
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:6WT4: Flavobacteriaceae STING binds 3',3'-cGAMP; contacts at 4.0A
  • Structure:6A03: Sus scrofa STING binds cyclic CMP; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #  ##                                                                  
6WT4_A         6 SPAFALAVGYFKNFIFPAITqiken---------------gevnpKICIYKPKHfdeltstnidmikaeltnkkyNLSEI 70  Flavobacteriaceae
6WT6_A       174 NLAHGFAWGYYYGYLKIILPdldktvrqwrr----vnnaegrmseKLFLFFPQScrcrdsiad----esslikhrGHLPI 245 Pacific oyster
5CFQ_A         3 NVADGLAWSYYFGYLKFVLPelekqiekts-----kfrskekfvkKMFILIPSNcfwddkipgsdydpqnritfeGNTEP 77  starlet sea ane...
6WT7_A       174 NLAHGFAWGYYYGYLKIILPdldktvrqwrr----vnnaegrmseKLFLFFPQScrcrdsiad----esslikhrGHLPI 245 Pacific oyster
XP_007904452 155 NVAHGLAWSYYLGYLKIVLPkleekinqyhr---eygnvlqqkgkKLYILIPFSckvldklek----vdtnivfyQNLPE 227 elephant shark
XP_014340157  98 GVAHGLAWSYYLGYLKLVLPeledriksynvs--hgnllkhketwRLHILLPLScsifdnlad----vdsnieflDNLSE 171 coelacanth
XP_015205204 175 NVGHGLAWSFYTGYLRLILPtgleasieeyhasrsaavlqhrdtwKLHILIPLSccipdklee----addnisflDNLPD 250 spotted gar
XP_020385478 159 NVAHGLAWSYYIGYLKLILPdleerikrhnv----rnvldckenwKLYILIPFSckvygklek----mdskiefyQNLPE 230 whale shark
RXM94758      40 NVAHGLAWSFYIGYLKLVLPrlkdsiqtfcdk--gnfvlkckdtwKLHILMPLSctipdklee----edsnieflDNLPD 113 sterlet
XP_029439681 162 NVAHGLAWSYFLGYLKLVLPnlekavclfnk---dndnllgtetcKLYILIPLScrihsnlsd----vdsniqflKDLPA 234 two-lined caeci...
Feature 1                    #                       #                                           
6WT4_A        71 NLSlkgaraRDILTLNkksk--------ihsYFDFPNtLLSLYSYVDFKiassnnnsselkkKKFVELLIEQFYLKLNEL 142 Flavobacteriaceae
6WT6_A       246 ITKdragiiERQYKNTiysvtdd-ngedyffAGEYIGvIHTMFEMEQNAttg--------lqTREKYVQSMRFYLTLKRI 316 Pacific oyster
5CFQ_A        78 LEKtrggvfLRHYKHSvyeikdg-enepwfcIMEYATpLLTLYDMSVAQpge--------lsREERDAQVVVFLRKLQDI 148 starlet sea ane...
6WT7_A       246 ITKdragiiERQYKNTiysvtdd-ngedyffAGEYIGvIHTMFEMEQNAttg--------lqTREKYVQSMRFYLTLKRI 316 Pacific oyster
XP_007904452 228 LLVdragikSRSYKHSiyliydqkkqqphhcILEYATpLRSLFEMTNDSaaa--------fsKEQRLDQAKLFYRTLKSI 299 elephant shark
XP_014340157 172 LQInragikGRSYKHSlyqvlde-dkrphycILEYATpLKSLLEMSKEAsae--------ftKEDRLEQTKLFYRTLKDI 242 coelacanth
XP_015205204 251 ITIdragirKRVFKHSiytvydq-akrphycVVEYATpLVTLYQMSQEAmag--------fdAEERLQQSTLFFRTLRDI 321 spotted gar
XP_020385478 231 ICIdragikARSYKNSiytiydq-nnrphhcVLEYATpLGSLFEMSNDAsaa--------fsKEKRLEQAKLFYVTLVNI 301 whale shark
RXM94758     114 IVIdragvrRRVYKHSlyavydd-akrphhcVLECATpLLSLYEMSKESlae--------fsTEDRLEQAKLFYRTLKDI 184 sterlet
XP_029439681 235 LHIdragikSRAYKNNiysilde-dqrpyycIVEYATpLLTLYEMSGITnag--------fsSEDRLQQAKLFYRTLKEI 305 two-lined caeci...
Feature 1                      
6WT4_A       143 IQENnl-tNNITFC 155 Flavobacteriaceae
6WT6_A       317 LDTDpecsKKCKIV 330 Pacific oyster
5CFQ_A       149 LEGDracqGKYELV 162 starlet sea anemone
6WT7_A       317 LDTDpecsKKCKIV 330 Pacific oyster
XP_007904452 300 LNNVpevtGSYRLI 313 elephant shark
XP_014340157 243 LDNSqecrGRFRLV 256 coelacanth
XP_015205204 322 LESSrecrGRYRLI 335 spotted gar
XP_020385478 302 LNNSqecaGYFRLI 315 whale shark
RXM94758     185 LDNSrdcrNSYRFI 198 sterlet
XP_029439681 306 LESSldcqNSYRLV 319 two-lined caecilian

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