Conserved Protein Domain Family
SPOC_PPS-like

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cd22581: SPOC_PPS-like 
SPOC (Spen paralog and ortholog C-terminal) domain found in Drosophila melanogaster protein partner of Sans-fille and similar proteins
Drosophila melanogaster protein partner of Sans-fille (PPS), also called protein partner of Snf, is a homolog of human DIDO. It mediates diverse chromatin activities, including the regulation of stemness genes in embryonic stem cells and splicing. PPS associates with spliceosomal RNAs including the U1 snRNP protein Sans-fille (Snf) to mediate sex determination gene Sex-lethal (Sxl) splicing autoregulation. Alternative splicing of the Sxl pre-mRNA determines gender during development in Drosophila, producing protein-encoding mRNAs in females but yielding inactive and truncated mRNAs in males. PPS contains a plant homeodomain (PHD) finger, Brahma and Kismet (BRK), a transcription elongation factor S-II subunit M (TFSIIM) domain, and a SPOC domain. This model corresponds to the SPOC domain that is involved in developmental signaling and has also been proposed to be a phosphorylation binding module.
Statistics
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PSSM-Id: 439214
Aligned: 27 rows
Threshold Bit Score: 145.822
Created: 30-Sep-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9VG78       1620 LWSGtLKMIDLAdFEIVMYPVQGNCHqlg--nlMPSQMDVIGRITRv-nVWEYIKKLKKSptKEVVIVNIFPasps---e 1693 fruit fly
KZS10631     1306 VWKGiINSVETGkVNVQALDMSGTSDlad--leMPSSLDVVGRIRPe-mVWDYVNQTRRAgtRDIVVFKFTPasds---d 1379 Daphnia magna
Q173D7       1032 HWTGnVHMIDVAsVEMSIRSVSGDVEevs--nkIPEDLEIVGTIRPe-mVWNYIGQLKRQdnYKICLVRFQSndt----- 1103 yellow fever ...
EFX79616     1208 FWNGeINSKEIGkINVEAVVIGPTQLipk--liLPSTLELIGRIKPe-mTWDYIKQTKRAgtRDIVIISFFPtses---s 1281 common water ...
KZS14419      916 VWNGtIRHRSMS-FRINMENLDTNSSpdladlaIPTALKVVGTIEPe-kVWNYLRQVRITsrEKIVVFHFTQalnaeisy 993  Daphnia magna
EFX82248      374 FWNGtFIHGDRS-FKAGLDSVVDNTRlvladldMPKSIRVVGTVEPe-kVWVYLRRVSETipEHIVVFQITPatta---d 448  common water ...
EFX79610      139 VWKGsVTYKDLK-FRVAMEVFDVNKPtdfmksvMPLSLEVVGNIDNpekVWNYLKRVKETidTEVIFLQCSPt------- 210  common water ...
CRK92671     1280 IYSGnMHMADVAsFDVTASVVSGNVDdil--klLPAQLEIAGRIEPh-tVWDYLEKVKKMtgKELCILRFSStdv----- 1351 Clunio marinus
XP_004988717  704 VWSGtVSMPEVAsVQMRGQLCFGPSAdla--nvLGSHIKQAGRIRPa-qVWSYIGKLRKTasKTYYLVALTPetdd---d 777  Salpingoeca r...
GAV05596      984 IWKGqVDTKDLPaAKLVATAVYGRAAefm--aeLPKVLDQLGRIQPg-qLWPYIEQVKPL--KEIAAVILKSpmsr---a 1055 Ramazzottius ...
Q9VG78       1694 tykFDLFFEYLDSR-----QRLGVLGVds-----dqIRDFYIFPLGSGDKLPPALQTaepvpf-yeeaqRPNTLLGIIVR 1762 fruit fly
KZS10631     1380 rkhYSSFLSHMYKH-----NRFAVVGAvs-----klIKDFYVVPLPKDSPIPLALVSlssgtksldenrTSSLLLGVVVR 1449 Daphnia magna
Q173D7       1104 -vaYEELYTNLLNR-----GKFGVFEKfp-----saIKDFYICPLPAEKMIHMILKPlrgvgi-iegdkKPNLLLGIIVQ 1171 yellow fever ...
EFX79616     1282 rqdYSLFIHHMEQH-----ERFAVVGPvs-----klIKDFYLVPLFRDKPIPAALISlskgid-wfqnrNYSLLLGIMIP 1350 common water ...
KZS14419      994 adcYQYFLDGFRKR-----NWFGVVGSvpdsklpctIKDFYITPLPKEDHIPRELETvasakc-lrenrLSDLLLAIVVI 1067 Daphnia magna
EFX82248      449 iegYKFFYNELKCL-----PMFAVIADapdsklpwrFKDFYVVPLGKASPLPFELPFyvkps--fqekrNSDYLIGVVVV 521  common water ...
EFX79610      211 --sYADWNLYLKFCkacqdMGIAVLGGvp-----spVKNLYLFPILKGRPIPKELNR------------ASSLLLGILVM 271  common water ...
CRK92671     1352 -agYFNFFSYLHSR-----ERYGVIKVls-----pkIKDFYVVPVEANRPVPKVLLPligpgfvegedhKPDLLLGVILK 1420 Clunio marinus
XP_004988717  778 empFVTLFEYFRSR-----DRLGVCGEvq-----psIKDAYLLPMKKGEQLPAELQKlrlkq--thalpDADHLLAVIIS 845  Salpingoeca r...
GAV05596     1056 sneFNSLHYFLTTR-----GRVSVLGPlp-----stFKDFYMIALKENEPLPESLRFpegvv---fpaeHPKLFLGIIVH 1122 Ramazzottius ...
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