Conserved Protein Domain Family
Slr4-like

?
cd22554: Slr4-like 
S (surface)-layer proteins similar to Pseudoalteromonas tunicata Slr4
Pseudoalteromonas tunicata D2 Slr4 (also known as EAR28894 protein) is an S-layer protein and the dominant protein within P. tunicata pellicle biofilm components. S-layers are self-assembling, paracrystalline proteinaceous lattices that form an interface between the cell and its extracellular environment; purified P. tunicata Slr4 protein is able to form square (p4 symmetry) paracrystalline lattices. Slr4 may protect cells and biofilm matrix components against stressors such as attack by viruses, bacteria or eukaryotes. The Slr4 family is widely distributed in gammaproteobacteria, including species of Pseudoalteromonas and Vibrio, and is found exclusively in marine metagenomes. It may play an important role in marine microbial physiology and ecology.
Statistics
?
PSSM-Id: 412100
Aligned: 65 rows
Threshold Bit Score: 107.167
Created: 30-Sep-2020
Updated: 30-Sep-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EAR28894     153 KPVIVAGIGGYKAEDTLTFQFSGAkldltkttaps-------------------------itvaaagqagaGVTFDILDI 207 Pseudoalteromon...
WP_138570745  47 LTFDVVVDKDHPSASTITLNFDKNvdlndgtvaltggavtqg-----------vgagtayagdvgfnygtgSFTFDDVVI 115 Pseudoalteromon...
WP_130151616  47 FDVDFVVKKLTPAASTVTLTFDDAvdlsdletlvgttavditndpatgtgvidsagdgsgtvyltfsygtgSFTFDRLVV 126 unclassified Ps...
WP_138589931  47 FDVDFVIAKETAAASKIVLTFDAGvsvsdladaldagsenvindpntgkgtiyddgqttgtklvefdygtgSFTFDKFKA 126 Pseudoalteromon...
WP_010561144  48 LSFDVIVDKNHPAASRITLTFDDAvrlgdlsactgdvvtdpasgngv--cgaaapatsvddavvtfdygtgSFTFDNVSV 125 Pseudoalteromon...
WP_138585134  47 VYFDIKVLKDHASGSFITLTFDDNvditaieaaadgsvtqvv------------ssgesqsgdvyfdygtgSFTFDDVTV 114 Pseudoalteromon...
WP_147389408  49 PGVRVIVREQLEAGDRIKLQFGAGldfeptgggfagvnl-----------------ynsntgtalpatgvpARTLGINTG 111 Pseudoalteromon...
WP_057830656  45 GSLRAIVRQQLEAGDKITLVFGKDmfstaptsatfasva------------------vpattevsitygsgTFTMGNAVI 106 Colwellia sp. T...
WP_119977519  50 TDFTFYNREELSAGDIVTITFPIGtvigsavaqvg--------------------------agvgtfetpgVVDLGSATV 103 Shewanella algi...
WP_046556214  49 QTIRVLNRAELVPGDKITLTFPIGtvladptlaa----------------------------dfsidygngTFTFTNITW 100 Arsukibacterium...
EAR28894     208 Td---------------SQIRFTVKAttpandfvrgngil----------elsnifldstglaaTTSVMVNSFGTNTsgt 262 Pseudoalteromon...
WP_138570745 116 Tdgdas-------kgetDSITFKVNLgnpltadsafrvvlgnh----gfggapndrvlvsgessVAYVSNKADKTQIe-- 182 Pseudoalteromon...
WP_130151616 127 Dad-------------aGTISFEVNLgnpitaesafrlsa-----------svdagvdfsgasqIAYASEESDGTAIe-- 180 unclassified Ps...
WP_138589931 127 Nkt-------------aNTIEFVVNLgnpltansafrmsf-----------egaagvdfvgaanVAYKSSTTAGVEIe-- 180 Pseudoalteromon...
WP_010561144 126 Tkydek-------kgtvDSISFDVNLgnpliadsafrviigsnddkttppltgsslavvlgetyVNYSSVQADLETPie- 197 Pseudoalteromon...
WP_138585134 115 Tqadkt-------kgipASISFNVNLgnpltansafrlrlad------dttsttplakilgastLQYKSTVSKTDATvi- 180 Pseudoalteromon...
WP_147389408 112 SgtyeleevpslrdvknGVVVLEVKTgftiekde----------------------sfevipdvLLFDSKATTANATvty 169 Pseudoalteromon...
WP_057830656 107 Tttl-----------gvTTMVFEVLTgdpvpkdasfeigv----------fgsdvaaakasaatVTYSAVSGLTGDAkdt 165 Colwellia sp. T...
WP_119977519 104 A----------------PTVKLTVAVgs-----------------------------------pVLNNSKTVVKLTDfnp 132 Shewanella algi...
WP_046556214 101 Tpsta---------tvaPKLEMEVQLgnpviansafdvi-------------fagtnfvpragnVTYKAVDGVSGVAkdt 158 Arsukibacterium...
EAR28894     263 k------------------fdesTAATIVSLLPQYTTEVTTlLDADIDVGKdRQQFAnnltadvlavkh---------tk 315 Pseudoalteromon...
WP_138570745 183 ----------------------tGTGVIATEVSQFDFKVDTkLDGLITRDD-LTSFIvgndnavktdvlky-----tfvn 234 Pseudoalteromon...
WP_130151616 181 ----------------------tGVGTLATTTSQFDFAVTApFDGRIERVA-QTTFAkngnnltvsdaaydtlgyylvdn 237 unclassified Ps...
WP_138589931 181 ----------------------tGTGVLATTESQFSFKVSQpYNGLIERLE-KKTFSkkgddstdagidalkl--tfndk 235 Pseudoalteromon...
WP_010561144 198 ----------------------tGMGKIAEETTQFGFEVSTkFDGIIDRDD-LTTFVdgstdksvwtft----------n 244 Pseudoalteromon...
WP_138585134 181 ---------------------etGSAVISEEVSQFSFAVGTeLDGLIKRDK-ATKFVgvndtdvdtdtlvy-----tftn 233 Pseudoalteromon...
WP_147389408 170 satkwqd-------gtpkdttgdNTGSFLKFATQYSAKVSTlLDGVIERED-QLSFIsgnvtgddnadtlkvg--itdna 239 Pseudoalteromon...
WP_057830656 166 --------------------tgdNTGKFIVTADQYGSSVTTkLDSVIKRDD-LEIFTnttgdtnvdilviki----tdaq 220 Colwellia sp. T...
WP_119977519 133 kagnavytaedgfsgepkdttgsNAVALTSAADQEVASVVTkLDGFVNREN-RDTFVfskgt------------------ 193 Shewanella algi...
WP_046556214 159 --------------------tgnNSAALTTSVAQRTVSAVTaFDGFVNRLD-RDEYNdkgsvfaevnv-----------k 206 Arsukibacterium...
EAR28894     316 nptsanvlvpANTTYVVTGDFSWAyapsvdtnkdgklssaelmaanvavlagg----------ddtvkslalnatntelt 385 Pseudoalteromon...
WP_138570745 235 deslglaltgAVTRINFDGNFKGVvgtaaptalsaestaavantg--------------------------aaigvltlp 288 Pseudoalteromon...
WP_130151616 238 adnleaslivTSATVELEGDFDNGvtgspvvggdpatv----------------------------------------gq 277 unclassified Ps...
WP_138589931 236 qtklqaaliaSTNTVELTGNFSNGgattgtitntensnfavsasgtaalsa--------------vgsavnqkltislpd 301 Pseudoalteromon...
WP_010561144 245 detlgaallvTDADIVYSGNFKTVvnseltastlk--------------------------------------------- 279 Pseudoalteromon...
WP_138585134 234 deslglalrnVDAIIRFDGNFKGVteaavlgtntadaltvtqsaastddiavvss------tgatptaiavtdeytygdt 307 Pseudoalteromon...
WP_147389408 240 syiaaatganVSADFVITGDFSDLvagdfavtadagadfv-------------------------------------nad 282 Pseudoalteromon...
WP_057830656 221 allsaanganVKATVTITGDFSAAtamtgvvvntdsgtantvtnlvia---------------------sdkksadftvv 279 Colwellia sp. T...
WP_119977519 194 -----lvgeiQITRPVVKGDTSLTaavstdtvvlsaksfkdltmkaatcsdgsavsidssytpscagaatvvapvaavvs 268 Shewanella algi...
WP_046556214 207 latagvqavvASETLVLNGTFNANtvaniaicadgtkptatfganlgalacga-----------ppalvsvagtlscsav 275 Arsukibacterium...
EAR28894     386 ivtnivgaaldaTNTITfnvpgyd----------------------------sgkgtnpMISVQDFTVKVDTmsdksvgs 437 Pseudoalteromon...
WP_138570745 289 tnassvvnavldTVTQTtpgtpikdtytnt-----------------vdfvngassvvdIPVTGDVTASVTVtsvsnggv 351 Pseudoalteromon...
WP_130151616 278 ftpaatfstsqdSLTFTavtpttdgaktag----------------tlvfdnttnttvvIPQTGDIAASATLavsngsaa 341 unclassified Ps...
WP_138589931 302 aaitnagvdspiTVTYDsgq------------------------------------tkvIPVTGAITAKVTAtitnasgt 345 Pseudoalteromon...
WP_010561144 280 -vntgtpasapaTVVMStgttpvavgvkhdlfgalvagktaytgtidftrvaastdaipVTTPTEVSVTIDAsnykvkaa 358 Pseudoalteromon...
WP_138585134 308 aavtpaavgvkeTYTETfifsndgdsttsipvtgdv----easvvitsastlqtggsavSVGANGYTVTSKV-------- 375 Pseudoalteromon...
WP_147389408 283 lsvalagdkksaTVTVVdtaaqddgiagtftl-------------ridnatrtgagtpiTIKATSFTIKGDVdfdgagti 349 Pseudoalteromon...
WP_057830656 280 deatvagiggtyTVTFDtnss-----------------------------------gnnPIKASAFQATVSIdadstvtt 324 Colwellia sp. T...
WP_119977519 269 csdataipactdTATFDvstltgalptvaapgt----------gkagkisiwgeatatkDIQLTNFDITRTVtyapvapv 338 Shewanella algi...
WP_046556214 276 apaacgandvrdTLTFNtatiaaaiaagng-----------------tfvvnfgttagnDIALTEITATHPVvytgvapv 338 Arsukibacterium...
EAR28894     438 ka--vnmpslaktAAGTWKLNGSVVVVPYVPFGPA-TQPILRHTNaGTQTGDITVRYMVEGVhtawqsl---aaagikDA 511 Pseudoalteromon...
WP_138570745 352 tlptngyvaysgvEAGKWAIDATIINVPYLPVNAAnTDTFIHFANeTDKEVDVIVTAIDNNGveygpm-----nlgakLA 426 Pseudoalteromon...
WP_130151616 342 -----tleiatnvDAGEWALDALVINIPYFPVGFEgLSTSVHFANeSANDADVIVTAIDQAGneydg-------tiadLA 409 unclassified Ps...
WP_138589931 346 p----siviadsvDAGKWALDATVINIPYFPVGFTgLSTSVHFANeSANKANVLVSAIDTDGkeysg-------sltdLA 414 Pseudoalteromon...
WP_010561144 359 d---fqdvifsevAGGEWKIDATIINVPYYVVNHAdTQSNIHMANeADEVADVIISAIDDMGneygpv-----dlgidLA 430 Pseudoalteromon...
WP_138585134 376 -------------PAGEWEVDATIINIPYLPINATnTSTFIHFANeTDKEVDVIVTAIDNRGneygpm-----nlgykLP 437 Pseudoalteromon...
WP_147389408 350 t---dtnvlaantNAGQWVLDATIINIPYFPVGFEgVNSQVNFANeSGAAVDVNVTAIDGAGvqysg-------sladLA 419 Pseudoalteromon...
WP_057830656 325 n---taqvtqtlaDAGQWKIDAAIINVPYFVVGKEgTSSSVHFSN-LGPKADVIVEAVSVVDaagksvtykavdlgfdLA 400 Colwellia sp. T...
WP_119977519 339 tv-apkldyikdaSFGEYQLDASVVNVPYLPVGYD-LTPNVEIANkAMTDAEIILEGFDHKGnqygpv-----tltkkAA 411 Shewanella algi...
WP_046556214 339 tn--qtfkyldaaSVGKTRLDASVVNVPYLPVGYPqFSTTVEVSNlGATDAEIILEAVGKTGvkygpv-----tlakkAV 411 Arsukibacterium...
EAR28894     512 KPGVRDMLGLVTDALKGegyds-tttgFKVALEVVT--NVPSkdVFVYGGAKITAEGQD 567 Pseudoalteromonas tunicata D2
WP_138570745 427 ANTVTKISEPAMDTLFGlng-----atTKLSVTFNV--DADKgdVTAYAVSQNDKGRTE 478 Pseudoalteromonas sp. S1608
WP_130151616 410 GDTVTKVSQVAIMEALGap------agSKLSVTFNI--NANDgdVNAYAFSNAGTGRQA 460 unclassified Pseudoalteromonas
WP_138589931 415 GNTVTKVSQGTIMTALGles----dssYKLSVTFNI--DANTgdVNAYAFSNAGDARQA 467 Pseudoalteromonas aurantia
WP_010561144 431 GNTVTKVKPKQIKEALGidd----ttvLKLSVTFNI--DAYAqdVAAYAFSQNSQGRSE 483 Pseudoalteromonas spongiae
WP_138585134 438 ANTVKKFSQTDMDTFFSlng-----vsTKLSVTFNV--DADKheVSAYAVSQNDKGRTE 489 Pseudoalteromonas sp. S558
WP_147389408 420 KYSTTKVSQVTLMAALKdskgntvpagSKLSVTFNI--DADDgkVNAYAFSEKVGLGRQ 476 Pseudoalteromonas peptidolytica
WP_057830656 401 ANSVTKVSQGAIISALGipa-----gtQKLSVTFNIdgKASD--VSAYAFTQNENGRSE 452 Colwellia sp. TT2012
WP_119977519 412 AHAVTKISEADIAAAFGit------gkAKLSVTFIL--DADEdeITLAPYYREGESRVN 462 Shewanella algidipiscicola
WP_046556214 412 KNGVTTVFESDMMTAFGlak----gdnEKLSVTFVIdaNAAD--ITLAPYYREGTSRIN 464 Arsukibacterium ikkense
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap