Conserved Protein Domain Family
av_Nsp3_ER-remodelling

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cd22528: av_Nsp3_ER-remodelling 
intracellular membrane remodeller motif of arterivirus non-structural protein 3 (Nsp3)
This domain is present in subunit Nsp3 of RNA-arteriviruses, such as porcine arterivirus PRRSV and equine arterivirus EAV. Nsp3 proteins are localized to the ER and appear to be essential for formation of double-membrane vesicles that originate from the ER during the life-cycle of the virus. Arterivirus Nsp3 is a predicted tetra-spanning transmembrane protein containing four transmembrane helices, with the N- and C-termini of the protein residing in the cytoplasm. It contains a cluster of four highly conserved cysteine residues that are predicted to reside in the first luminal domain of the protein. These conserved cysteines play a key role in the formation of double-membrane vesicles (DMVs); mutagenesis of each completely blocked DMV formation.
Statistics
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PSSM-Id: 412095
Aligned: 23 rows
Threshold Bit Score: 87.7629
Created: 29-Apr-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ADI59013      851 STFTCLPIKCGIGTRDPFCRRVFSVPVTKTQEHCHAGMCASAEGISLD-SLGLTQLQS 907  Equine arteritis virus
AVM86057     1139 GLVLQQPSVCGVGTNDRFCRDPFARPTEAYQGYCHAGYCLSSAGLSTA-GSLMPQGLL 1195 Olivier's shrew virus 3
AKI29954     1210 GLWFQSSHACGVGTSDPFCKGSFGVPIVQQQDICDSGFCGSPFGVSRSlVHYLTPDVS 1267 Pebjah virus
ALS54236     1237 GNYLQAPAPCGVGTPNPFCRGSYVYPVTANHGVCHHGMCMSDAGISRHaFFSLPSFSV 1294 Free State vervet virus
YP_009118960 1369 GLFAQRARVCGVNTNDPFCQSPYGVPVVLSQGYCDSGACISAAGYSVE-APAIFVDST 1425 African pouched rat arterivirus
Q83017       1306 SAWLSSPVSCGRGTNDPWCKNPFSYPVVGQGVMCNSHLCISEDGLTSP-MVLSYSLID 1362 Lactate dehydrogenase elevating vir...
Q06502       1304 SAWLSSPVSCGRGTNDPWCRNPFSYPVVGQGVMCNSHLCVAEDGLTSP-MTLSYSLID 1360 Lactate dehydrogenase elevating vir...
Q04561       1484 GLWFTSPQVCGRGTADPWCSNPFSYPTYGPGVVCSSRLCVSADGVTLPlFSAVAQLSG 1541 Lelystad virus
A0MD28       1467 GLWFTSPQVCGRGTADPWCSNPFSYPAYGPGVVCSSRLCVSADGVTLPlFSAVAQLSG 1524 PRRSV SD 01-08
Q9YN02       1600 GIYVTAVGSCGTGTNDPWCANPFAVPGYGPGSLCTSRLCISQHGLTLPlTALVAGFGI 1657 PRRSV 16244B
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