6Y53


Conserved Protein Domain Family
KH-I_DDX46

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cd22473: KH-I_DDX46 
type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins
DDX46, also called PRP5 homolog, is an ATP-dependent RNA helicase that plays an essential role in splicing, either prior to, or during splicing A complex formation. It inhibits antiviral innate responses by entrapping selected antiviral transcripts in the nucleus. It is also involved in the development of several tumors. Members in this subfamily contain a divergent KH domain that lacks the RNA-binding GXXG motif.
Statistics
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PSSM-Id: 411901
Aligned: 23 rows
Threshold Bit Score: 150.929
Created: 20-Jul-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6Y53_PP       928 SFKRYEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEp-----kEGERKIYLAIESaNELAVQKAK 1002
EEC12441      922 RFQKFEEELEINDFPQQARWKVTSKEAMAQISEYSEAGITVRGTYYPPGKEa-----kGGERKLYLAIEStNELAVSKAR 996  black-legged ...
XP_027210188  966 THHKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTFCPPGKNp-----pEGERKLFLAIEStSELAVSKAK 1040 Penaeus vannamei
NP_573020    1121 PFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKNp-----pDGERKLYLAIEScSELAVQKAK 1195 fruit fly
XP_018654341 1221 MVRRYEEELVINDFPQNVRWRITGREMLNHLSDYCDVGVSVRGVYMPPAKAkqhipegTDDRPLYLCIEAvNERQVALAK 1300 Schistosoma m...
NP_001033411  867 AWEYFEEEWDINDFPQQVRYKICSRESVGHVAELAEVGISVRGVHVPPGKEp-----kNGERRLHLLLEArSERNLKAAK 941  Caenorhabditi...
XP_019853852 1040 QLIHYEDDIDINDFPQSIRFKITTRDVLDDIGELSDSYISVRGIYVPPGKQnk----lTDTSRLHLLIEGkTERSVTVAK 1115 Amphimedon qu...
KXJ21164      508 ETERYEDEVEINEFPQTARWKITSKDTIMAITEYSECAVTVRGTFFPPGKEp-----kEGERKIYLYIEGpSERAIQLAK 582  Exaiptasia pa...
RDD47700      985 EVTRYSEELPINDFPQNARWKITSKDTISDITELSECSITVRGTYFPPGKEp-----gEGQRKIYLYLEGpNERSVQIAT 1059 Trichoplax sp...
XP_014158416  197 ANKHFEEELEINDFPQNARWKVTSKEAVLDLQEYSGAAITIRGIFYAPGKKvp----aDGERKLFLFIEAdSERKIQIAR 272  Sphaeroforma ...
6Y53_PP      1003 AEITRLIKEELIRLqn-syQPTNKGRYKV 1030
EEC12441      997 AEIIRLIKEEMVKMqh-syQPINRGRYKV 1024 black-legged tick
XP_027210188 1041 AEIIRLIREELVKLrtsagPVKAQGRYKV 1069 Penaeus vannamei
NP_573020    1196 REITRLIKEELLKLss-ahHVFNKGRYKV 1223 fruit fly
XP_018654341 1301 KEIMRIIKEELVKLqs--gNSINRGRYKV 1327 Schistosoma mansoni
NP_001033411  942 EEIIRIMKEAFRQLtaqlqRGGTQARYKV 970  Caenorhabditis elegans
XP_019853852 1116 QEIKHLVKEEAQKLaahvnPYQKTGRYSV 1144 Amphimedon queenslandica
KXJ21164      583 VEIKRIVKEELVRLgt-yrGPQQTGRYKV 610  Exaiptasia pallida
RDD47700     1060 AEIKRILKEEILKAkt--mQSLRPGRYKV 1086 Trichoplax sp. H2
XP_014158416  273 SEIKRIIKEEILKTss--mPQRNTGRYAI 299  Sphaeroforma arctica JP610
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