Conserved Protein Domain Family
KH-I_RIK_like_rpt1

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cd22471: KH-I_RIK_like_rpt1 
first type I K homology (KH) RNA-binding domain found in Arabidopsis thaliana protein RIK and similar proteins
RIK, also called rough sheath 2-interacting KH domain protein, or RS2-interacting KH domain protein, is a RNA binding protein that acts together with RS2/AS1 in the recruitment of HIRA. RIK contains two type I K homology (KH) RNA-binding domains. The model corresponds to the first one. The KH1 domain is a divergent KH domain that lacks the RNA-binding GXXG motif.
Statistics
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PSSM-Id: 411899
Aligned: 6 rows
Threshold Bit Score: 132.208
Created: 20-Jul-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9LIA4         84 DEVIIAREIVINDAEaSLRHRLTKRSTQEDIQRstGAVVITRGKYRPPNAPp----dGEKPLYLHISAaaqlqlketter 159  thale cress
PNW78613       84 GALELAREVVINDAPtGVRIHLTKRGVQDEIQSrtATIIVTRGRYYPPGVQpd---gKEKPLHLLVRPgahagt-tdaek 159  Chlamydomonas...
PRW20517      157 AQSHIKSEVTFNNTApRTRNILTKRSTHLELEQkwRVAVVVRGRYYPPGQKatsntdDERPLFLRITPgrtlpp-dpqwr 235  Chlorella sor...
XP_014161078   46 ASSSLMRDIEVNNVPaMIRLEVTRQAFHNQLQSefGVSVCTKGRYCEPGTSlp---dNERPLYLSLWAtepe------sl 116  Sphaeroforma ...
XP_005648327   72 EESGISRQVTINDAPpDMRHHLTKRPTQDDIGRrtGTQIVTRGRYMPPGMPps---dTEQPLYLFITPgasste-ddaek 147  Coccomyxa sub...
XP_024370704  105 HDEVISREIVINYADpSVRYKLTKRQTQEEIQAktGAVVITRGRFRPPNGPp----eSEKPLYLHISAgvqlkd--taer 178  Physcomitrell...
Q9LIA4        160 iLAVDRAAAMIEEMM 174  thale cress
PNW78613      160 hQAVSNAVSDIQRIL 174  Chlamydomonas reinhardtii
PRW20517      236 qHACDMCAADVTAII 250  Chlorella sorokiniana
XP_014161078  117 tKAVAKLMGHTQLLP 131  Sphaeroforma arctica JP610
XP_005648327  148 qRCVDAAAAEIQAML 162  Coccomyxa subellipsoidea C-169
XP_024370704  179 iKAVDAAAALVEEMM 193  Physcomitrella patens
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