3N89


Conserved Protein Domain Family
KH-I_CeGLD3_rpt1

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cd22441: KH-I_CeGLD3_rpt1 
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first type I K homology (KH) RNA-binding domain found in Caenorhabditis elegans defective in germ line development protein 3 (CeGLD-3) and similar proteins
CeGLD-3, also called germline development defective 3, is a Bicaudal-C (Bic-C) homolog that is involved in the translational control of germline-specific mRNAs during embryogenesis. It interacts with the cytoplasmic poly(A)-polymerase GLD-2. The two proteins cooperate to recognize target mRNAs and convert them into a polyadenylated, translationally active state. CeGLD-3 contains four K-homology (KH) RNA-binding domains, which are divergent KH domains that lacks the RNA-binding GXXG motif. The model corresponds to the first one.
Statistics
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PSSM-Id: 411869
Aligned: 4 rows
Threshold Bit Score: 114.235
Created: 10-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3N89_A     29 RVTLNMEFESQYYSLMTsdn--gdHENVASIMAETNTLIQLPDRSvggttpdpFAQQVTITGYFGDVDRARMLMR 101  Caenorhabditis elegans
Q95ZK7    113 RVTLNMEFESQYYSLMTsdn--gdHENVASIMAETNTLIQLPDRSvggttpdpFAQQVTITGYFGDVDRARMLMR 185  Caenorhabditis elegans
PAV84746  219 RTTLCMEIYSGQHKELFckevlqgPDSIYQISRDTSKIICFPDTEdkv---eeYANQITITGHFVNVEVARHRLR 290  Diploscapter pachys
EFX75400   13 PVKLSMEVSFTTHSHIIgr----aGTNINTVMKETSTKIHFPDENrva--gekKSNEVTISGELVNVETARRRIR 81   Daphnia pulex
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