Conserved Protein Domain Family
DPBB_EXPA_N

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cd22274: DPBB_EXPA_N 
N-terminal double-psi beta-barrel fold domain of the alpha-expansin subfamily
Alpha-expansins (EXPA, expansin-A) have cell wall loosening activity and are involved in cell expansion and other developmental events during which cell wall modification occurs. They also affect environmental stress responses. Arabidopsis thaliana EXPA1 is a cell wall modifying enzyme that controls the divisions marking lateral root initiation. Nicotiana tabacum EXPA4 positively regulates abiotic stress tolerance, and negatively regulates pathogen resistance. Wheat TaEXPA2 is involved in conferring cadmium tolerance. Alpha-expansins belong to the expansin family of proteins that contain an N-terminal domain (D1) homologous to the catalytic domain of glycoside hydrolase family 45 (GH45) proteins but with no hydrolytic activity, and a C-terminal domain (D2) homologous to group-2 grass pollen allergens. This model represents the N-terminal domain of alpha-expansins, which adopts a double-psi beta-barrel (DPBB) fold.
Statistics
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PSSM-Id: 439254
Aligned: 68 rows
Threshold Bit Score: 162.771
Created: 27-Jul-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9C554    26 GWVNAHATFYGGgda--sgTMGGACGYGNLYsqGYGTNTAALSTALFNNGLSCGACFEIRCQndgk--wclPGSIVVTAT 101 thale cress
Q9SZM1    27 DWKIATATLSRDrdgsssvATGGACGYGDLRqsSFAGYSAGLSGKLFNRGSSCGACLEVRCVnhirwclqgSPSVVVTAT 106 thale cress
Q9FL76    89 GWGHGRATFYGDing--geTQQGACGYGDLHkqGYGLETAALSTALFNNGSRCGACYEIMCEhapq--wclPGSIKITAT 164 thale cress
Q9FL79    53 SWYDARATFYGDihg--geTQQGACGYGDLFkqGYGLETAALSTALFNEGYTCGACYQIMCVndpq--wclPGSVKITAT 128 thale cress
Q9FL78    57 NWYDARATFYGDihg--gdTQQGACGYGNLFrqGYGLATAALSTALFNDGYTCGACYEIMCTrdpq--wclPGSVKITAT 132 thale cress
Q9FL80    57 NWYDARATFYGDihg--gdTQQGACGYGNLFrqGYGLATAALSTALFNDGYTCGACYEIMCTrdpq--wclPGSVKITAT 132 thale cress
Q9FL77    54 SWYDARATFYGDihg--geTQQGACGYGDLFkqGYGLETAALSTALFNEGYTCGACYQIMCVhdpq--wclPGTIKITAT 129 thale cress
Q69XV9    31 EWRMGSATYIKEslghplnDGGGACGYGDLDifRYGRYTAGVSGALFGRGSACGGCYEVRCVnhvlwclrgSPTVVVTAT 110 Japanese rice
TEY29974  25 EWKSATATYSTDsnd--smLTEGACGYGDLHk-SYGKYTTGLSGMLFDRGSSCGACFEVRSAqlp----qaTPPILVTAT 97  Salvia splendens
PKA56557  26 DWSLATAAPTSAps----pTGVGACGYAQESd-YLRRRWAAVSGELFRSGAACGSCFEIRCVdhillclpgSPPAVVTAS 100 Apostasia shenzhenica
Q9C554   102 NFCPPnnalpnnaggwcnPPQQHFDLSQPVFQRIAQYr-AGIVPVAYRRVPC 152 thale cress
Q9SZM1   107 DFCPPnsglssdyggwcnFPKEHLELSHAAFTGIAETr-AEMIPIQYRRVKC 157 thale cress
Q9FL76   165 NFCPPdftkpn--dnwcnPPQKHFDLSQPMFLKIAKYk-AGVVPVKFRRVPC 213 thale cress
Q9FL79   129 NFCPPdyskte--gvwcnPPQKHFDLSLPMFLKIAQYk-AGVVPVKYRRISC 177 thale cress
Q9FL78   133 NFCPAnysktt--dlwcnPPQKHFDLSLAMFLKIAKYk-AGVVPVRYRRIPC 181 thale cress
Q9FL80   133 NFCPAnysktt--dlwcnPPQKHFDLSLAMFLKIAKYk-AGVVPVRYRRIPC 181 thale cress
Q9FL77   130 NFCPPdyskte--gvwcnPPQKHFDLSLPMFLKIAQYk-AGVVPVKYRRISC 178 thale cress
Q69XV9   111 DFCAPnlglsddyggwcnFPKEHFEMSEAAFLRVAKAk-ADIVPVQFRRVSC 161 Japanese rice
TEY29974  98 DFCPPnyalpadhggwcnFPRAHFHLPEATFSLISHLk-PQLLPIHYRRAAC 148 Salvia splendens
PKA56557 101 DFCAPnlglpsddggwcnFPRNHFDLSLPAFAAIARPaaRAIVPVQYRRARC 152 Apostasia shenzhenica
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