2HCZ,5XBU


Conserved Protein Domain Family
DPBB_EXP_N-like

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cd22271: DPBB_EXP_N-like 
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N-terminal double-psi beta-barrel fold domain of the expansin family and similar domains
The plant expansin family consists of four subfamilies, alpha-expansin (EXPA), beta-expansin (EXPB), expansin-like A (EXLA), and expansin-like B (EXLB). EXPA and EXPB display cell wall loosening activity and are involved in cell expansion and other developmental events during which cell wall modification occurs. EXPA proteins function more efficiently on dicotyledonous cell walls, whereas EXPB proteins exhibit specificity for the cell walls of monocotyledons. Expansins also affect environmental stress responses. Expansin family proteins contain an N-terminal domain (D1) homologous to the catalytic domain of glycoside hydrolase family 45 (GH45) proteins but with no hydrolytic activity, and a C-terminal domain (D2) homologous to group-2 grass pollen allergens. This family also includes GH45 endoglucanases from mollusks. This model represents the N-terminal domain of expansins and similar proteins, which adopts a double-psi beta-barrel (DPBB) fold.
Statistics
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PSSM-Id: 439251
Aligned: 146 rows
Threshold Bit Score: 55.8445
Created: 17-Jul-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2HCZ_X         20 LTARATWYGqpnga--------gapdnGGACGIKnvnlp----pysgMTACGNVpifk-------dgkGCGSCYEVRCke 80   Zea mays
XP_013897928   30 YSGAATFYGgpqdsatt---eyntkiaTGSCGYGdidpk---lwpfyLVAGLSPsnpliq---slkerGCGSCLEVECvg 100  Monoraphidium...
RMZ52312       21 TVGSAASGGdsp-------------agSGACGYGtlsas---swpydAIAVVNPdspfla---gsapqGCGTCLEIQCtd 81   Auxenochlorel...
XP_005648394   34 TQGIATNYGgyqdgmdp--yqysygtsIGSCGYGkldks---kypywSVGALSTsnhfyq---egpvkGCGQCFEVEClq 105  Coccomyxa sub...
PRW57696      489 IDGTAVPYGgpadgqdp--hvasgglvSGSCGYGqlsqq---dwphwAAVAVSPqsflsangtrhpllGCGACLELRCdp 563  Chlorella sor...
PNW73437       36 TSGTSVFWGgpqdgqdd---pfnvrlpPGACGYGeldskmwpffyvtGISAHSDlvrd------rpqaSCGTCLEIRCsa 106  Chlamydomonas...
PRW55961       40 ELGFGTTYAp----------------eQGACGYGalppd---qwpfgGIAAIDPlaspfa---vgvqqGCGVCLEVQCtd 97   Chlorella sor...
XP_005652344   31 VSGFATQYGgkrdggdp--nkpvygllDGACGYGefskt---ewpnwQVAAISQsnpiatr-gqpqkrGCGACIEVACns 104  Coccomyxa sub...
PRW59395      461 TAANATSYAalgalpngtspsnttalrLGACGFSvdrtys--swpgiSTGALGPgnpfan---eldmtGCGACFEVQCgq 535  Chlorella sor...
PNW78064      127 VTARAFRFGaagea---------vtlpTNHCGYGplt--------spYVAGISPasplaq---rlaqaGCGVCLEVACae 186 
2HCZ_X         81 kp------------------------------ecsGNPVTVYITDMNYepiapyHFDLSGKAFgslakpglndkirhcGI 130  Zea mays
XP_013897928  101 ap-----------------------------chpgVGPVQALITDECAercsssQVNLHVFGFemla-------ptdlGT 144  Monoraphidium...
RMZ52312       82 ev-----------------------------cgsaAGAFVALVTDNCDgcd-lsQIYVSPTAYaksf-------spsiGL 124  Auxenochlorel...
XP_005648394  106 nngqfa---------------------grcnsdsnARSVTIMITDSCPece-adHLDIQALTFnkma-------pmslGR 156  Coccomyxa sub...
PRW57696      564 rpgfkg----------------------rcpdnsdGASIIALVTDTCKdcp-ptKLTLHYLAFqqkla------npdqGE 614  Chlorella sor...
PNW73437      107 ndtk-------------------------vcagpaNSSITVLVTDECPqcr-anELNLHAFAFeqis-------qlkyGS 153  Chlamydomonas...
PRW55961       98 pt-----------------------------acgtSQSLVVLVTDHCDgcg-asAVYLAPSAFgqlv-------pgplGS 140  Chlorella sor...
XP_005652344  105 ta------------------------------ctgDGSLTVLVTDDCKdck-pqQININALAFerhi-------ssvsGS 146  Coccomyxa sub...
PRW59395      536 gngtsaqs------------------pciagaggnRSSVIITVQDGCPgcp-adQLALHPLAFarla-------nlsrNA 589  Chlorella sor...
PNW78064      187 gspgclvpsaaaalsppsshwgspevaaatsnvlaPGRLLLQVADTCNscd-plDLNLHTDAWtrla-------dparGS 258 
2HCZ_X        131 MDVEFRRVRC 140  Zea mays
XP_013897928  145 VDVRYRLIAC 154  Monoraphidium neglectum
RMZ52312      125 ATGRATAVPC 134  Auxenochlorella protothecoides
XP_005648394  157 IDIRYRRVEC 166  Coccomyxa subellipsoidea C-169
PRW57696      615 VGIKYRLVEC 624  Chlorella sorokiniana
PNW73437      154 VAIQYRQVEC 163  Chlamydomonas reinhardtii
PRW55961      141 VAGRVRRVNC 150  Chlorella sorokiniana
XP_005652344  147 VDVVWRQVPC 156  Coccomyxa subellipsoidea C-169
PRW59395      590 IPVRYRQVAC 599  Chlorella sorokiniana
PNW78064      259 VNVTYRRVSC 268 
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