Conserved Protein Domain Family
H1_KCTD12b

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cd22216: H1_KCTD12b 
H1 domain found in potassium channel tetramerization domain-containing protein 12b
Potassium channel tetramerization domain-containing protein 12b (KCTD12b) is a BTB/POZ domain-containing protein that is an auxiliary subunit of gamma-aminobutyric acid type B (GABA-B) receptors associated with mood disorders. KCTD12b consists of an N-terminal BTB domain followed by a region called the H1 domain. The BTB domain mediates interaction with the receptor. The C-terminal H1 domain, which possesses a beta-propeller-like fold, engages in interactions with G-protein beta-gamma subunits and is responsible for desensitization. This model corresponds to the H1 domain.
Statistics
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PSSM-Id: 409027
Aligned: 6 rows
Threshold Bit Score: 263.043
Created: 23-Jul-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putativeputative G
Feature 1:putative pentamer interface [polypeptide binding site]
Evidence:
  • Comment:based on the pentameric structures of the H1 domains of human KCTD12 and KCTD16

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ## #   #  #        # ###     # ##                #        # ##      # ## ##  
NP_780638    174 KKAGFITIGYRGSYTLGRDsQADAKFRRVARIMVCGKISLAKEVFGdTLNESRDPDRpPERYTSRYYLKFtFLEQAFDKL 253 house mouse
XP_005992957 167 RRSGFISIGYRGSYTLGRDsQTDAKFRRVARIMVCGKTSLAKEVFGdTLNESRDPDRpPERYTSRYYLKFtFLEQAFDKL 246 coelacanth
XP_004940827 176 RRAGFITIGYRGSYTLGRDsQTDAKFRRVARIMVCGKTSLAKEVFGdTLNESRDPDRpPERYTSRYYLKFtFLEQAFDKL 255 chicken
XP_018085108 169 RRSGFITIGYRGSYTLGRDsQTDAKFRRVARIMVCGKTSLAKEVFGdTLNDSRDPDRpPERYTSRYYLKFtFLEQAFDRL 248 African clawed ...
NP_001017631 163 QRSGFITIGCRGSYTLGRDcQTDAKFRRVARIMVCGKTSLAKEVFGeTLNESHDPDRqPDRYTSRYYLKFtSLEQAFDRL 242 zebrafish
XP_007889728 188 KRAGFITIGYRGSYTLGRDsQTDAKFRRVARIMVCGKTALAKEVFGeTLNESRDPDRpPERYTSRYYLKFtFLEQAFDKL 267 elephant shark
Feature 1        #     # ########           # #  ## #  
NP_780638    254 ADAGFHMVACNSTGTCTvtHDQTDDRIWTSYTEYVFYR 291 house mouse
XP_005992957 247 ADAGFHMVACNSTGTCAfaHDQTDDKIWTSYTEYVFYR 284 coelacanth
XP_004940827 256 ADAGFHMVACNSTGTCAfaHDQTDDRIWTSYTEYVFYR 293 chicken
XP_018085108 249 ADAGFHMVACNSTGTCAfaHDQTDDKIWTSYTEYVFYR 286 African clawed frog
NP_001017631 243 ADAGFHMVACNSTGTCAfaHVQTDDKIWTSYNEYVFYR 280 zebrafish
XP_007889728 268 AEAGFHMLSCNSTGTCAfaHEQTDDKIWTSYTEYVFYR 305 elephant shark

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