Conserved Protein Domain Family
F-box_FBXL21

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cd22179: F-box_FBXL21 
F-box domain found in F-box/LRR-repeat protein 21 (FBXL21) and similar proteins
FBXL21, also called F-box and leucine-rich repeat protein 21, F-box and leucine-rich repeat protein 3B (FBXL3B), or F-box/LRR-repeat protein 3B, is the substrate-recognition component of the SCF(FBXL21) E3 ubiquitin ligase complex that mainly acts in the cytosol and mediates ubiquitination of CRY proteins (CRY1 and CRY2), leading to CRY protein stabilization, and thus, is involved in circadian rhythm function. It regulates the oscillation of the circadian clock through ubiquitination and stabilization of cryptochromes. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438950
Aligned: 5 rows
Threshold Bit Score: 94.2044
Created: 11-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structure evidence that Homo sapiens FBXL3 interacts with Skp1
  • Comment:F-box proteins participate in SCF (Skp1-Cul1-F-box protein) complexes that function as ubiquitin E3 ligases, where the role of the F-box protein is to recruit target substrates.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ### #   #  ##  ## ### ######## ##         
Q9UKT6        40 LDWGSLPHHVVLQIFQYLPLLDRACASSVCRRWNEVFHISDLW 82  human
XP_693270     54 ETWGNLPHHVVLHIFQYLSLVDRARASSVCRRWNEVFHIPDLW 96  zebrafish
NP_001257923  43 IDWGSLPHHVILRIFQFLPLVDRARASSVCRRWNEVFHIPDLW 85  chicken
XP_005999818  43 VEWGNLPYDVILHIFQYLTLVDRARASSVCQRWNEVFHIPELW 85  coelacanth
XP_018107511  64 LDWGNLPHHVVLHIFQYLRLVDRARVSSVCRRWNEVFHIPELW 106 African clawed frog

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