Conserved Protein Domain Family
F-box_AtSKIP22-like

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cd22165: F-box_AtSKIP22-like 
F-box domain found in Arabidopsis thaliana SKP1-interacting partner 22 (AtSKIP22) and similar proteins
AtSKIP22, also called F-box protein SKIP22, is a component of SCF (SKP1/ASK-cullin-F-box protein) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. It interacts with SKP1A/ASK1 and SPK1B/ASK2. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438936
Aligned: 17 rows
Threshold Bit Score: 63.4466
Created: 5-Aug-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #   #  ##  ##   # ##   ### #              
Q9ZUB8        321 CLMRLPtELKLKILELLPGVSIGNMACVCTEMRYLASDNDLWKQKC 366  thale cress
ADE77516      143 SLILLPtELKLKILEFLPAVDVARLGCVCTEFRFLSVNDELWKKKY 188  Sitka spruce
XP_010904578  158 SLMSLPtDLKTRILDFLPGVDLARMQCVCAEWKQLASSDQLWKQKF 203  African oil palm
EEE58649      293 CLMALPgDVKAKVLEFVPGVDLARVQCTCKELRDLAADDNLWKKKC 338  Japanese rice
PTQ50364      270 SLLRLPtELKIKVLDSLPAVALASLACVSSELRFLAASEDLWKQQY 315  liverwort
EYU37551      352 YFMRLStKLKLKILESLSVADLANVGSVCHELKCLASSDKLWKSKY 397  spotted monkey flower
KMZ59982      188 CFTNLPtDMKIRILEFLRGDDLARIGCVDVEMNRLSSNDELWKKKF 233  Zostera marina
OAY68371      197 CYMRLSrDLKTDILELVSGVDLARIACTCSEMSAICSDDKLWKKKF 242  pineapple
TKV97322      331 CLMALPaDLKSKVLDLLPGDDLARVECTCKEMRNLAADDSLWKKFV 376  Setaria viridis
OMO52883     1575 RLMQLPlELQFNILYLLQGIDLARLACVCSELKSLCDSDDLWWQKF 1620 Corchorus capsularis

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