Conserved Protein Domain Family
F-box_ScMDM30-like

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cd22143: F-box_ScMDM30-like 
F-box domain found in Saccharomyces cerevisiae mitochondrial distribution and morphology protein 30 (ScMDM30) and similar proteins
ScMDM30 is an F-box protein required for maintenance of fusion-competent mitochondria in yeast. It is the substrate-recognition component of an SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. ScMDM30 recognizes FZO1 and regulates the amount of FZO1. It acts as a regulatory factor for the mitochondrial fusion machinery and is required for mitochondrial DNA maintenance. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438915
Aligned: 19 rows
Threshold Bit Score: 52.6139
Created: 6-Jul-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #   #  ##  ##   # ##   ### #             
Q05930         15 TIDHLPPEIWLCISKLVgTSDLHNLCLINRrLYLTITsdeIWKRR 59   Saccharomyces cerevisiae S288C
ETS01591        3 ALLDCPAEILHAIFEHLpTSSLHALCLVNKrLHQIAEp-lLYTEI 46   Trichoderma reesei RUT C-30
P47005         48 PLTKLPDELMQEVFSHLpQPDRLQLCLVNKrLNKIATk-lLYRRI 91   Saccharomyces cerevisiae S288C
O93998        116 KLLSLPDELFIEIMSLLnQLDKINLLFVNKrMNNLARv-sLQRVI 159  Candida albicans
OJD18502       21 PILRLPPETFNAIFAYAsSSDLVNLALVSKhFHGLAAa-qLYRSL 64   Emergomyces pasteurianus Ep9510
THV53397        3 AFAELPDELFSIIFSLVpSGTLHSLSLVSRaFNRCSTp-qLYRHI 46   Botrytis galanthina
XP_007377889   15 ALLSLPDEVTTQIIAVLsQIDILSLIQVNKhLYSLGLp-kLYHSI 58   Spathaspora passalidarum NRRL Y-27907
XP_022461854   13 AFDEIPIEIWHIICKHLePAQKFNLSLVNRhMNSLISndeLWFED 57   Kuraishia capsulata CBS 1993
Q6CG37        198 DLNSLPHEIMSKIVSHLdQRDVTMCLYVNKnMYSTAVr-qLYKEP 241  Yarrowia lipolytica CLIB122
KFK33076       23 LFNTLPIELINTITARVsRRYYPILSCVSKhFRTTLLspeIHKIR 67   gray rockcress

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