1LDK,1FQV,1FS1,1FS2


Conserved Protein Domain Family
F-box_FBXL1

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cd22114: F-box_FBXL1 
Click on image for an interactive view with Cn3D
F-box domain found in F-box/LRR-repeat protein 1 (FBXL1) and similar proteins
FBXL1, also called S-phase kinase-associated protein 2, cyclin-A/CDK2-associated protein p45, F-box protein Skp2, or p45skp2, is the substrate-recognition component of an SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins involved in cell cycle progression, signal transduction and transcription. It specifically recognizes phosphorylated CDKN1B/p27kip and is involved in regulation of G1/S transition. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438886
Aligned: 12 rows
Threshold Bit Score: 63.9691
Created: 11-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Skp1/Cul1
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:Skp1/Cul1 binding site [polypeptide binding site]
Evidence:
  • Structure:1LDK; Homo sapiens FBXL1 in complex with Skp1 and Cul1, contacts at 4A
  • Comment:F-box proteins participate in SCF (Skp1-Cul1-F-box protein) complexes that function as ubiquitin E3 ligases, where the role of the F-box protein is to recruit target substrates.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        # ######  ##   #     #  ##  #   #      #   
1LDK_E         1 WDSLPDELLLGIFSCLC--LPELLKVSgVCKRWYRLASDESLW 41  human
1FQV_A         9 WDSLPDELLLGIFSCLC--LPELLKVSgVCKRWYRLASDESLW 49  human
1FS1_A         9 WDSLPDELLLGIFSCLC--LPELLKVSgVCKRWYRLASDESLW 49  human
1FS2_A         9 WDSLPDELLLGIFSCLC--LPELLKVSgVCKRWYRLASDESLW 49  human
Q13309        97 WDSLPDELLLGIFSCLC--LPELLKVSgVCKRWYRLASDESLW 137 human
XP_014346653  61 WDKLPDELLLGIFYCLP--LADLLKVSqVCKRWRCLAFDETLW 101 coelacanth
NP_001076306  88 WDSLPDELLLGIFSRLS--LQDLLRTSrVCKRWHRLAFDESLW 128 zebrafish
NP_001007983 118 WDELPDELLLAIFAYLP--LNDLLKVSmICKRWHRLSFDESLW 158 chicken
NP_001135611  94 WDTLPDELLLGIFNYLH--LIDLLRAArVCKRWHRLLTDESLW 134 tropical clawed frog
XP_002602530  13 FSCLPDELILRVFSFLQpaLVHLPPVAqVCKRWCGLCQDSSLW 55  Florida lancelet
EFJ16914      76 ASEIPDEVLLKIFTFLE--VTDLSASRqVCKRWYLLCSSDCLW 116 Selaginella moellendorffii
GAQ83437       7 LSQLPGELLLKIFQGLG--LHDLLTVSqVCKAWHLLSSSDLLW 47  Klebsormidium nitens

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