Conserved Protein Domain Family
F-box_FBXO42

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cd22110: F-box_FBXO42 
F-box domain found in F-box only protein 42 (FBXO42) and similar proteins
FBXO42, also called FBX42, or just one F-box and Kelch domain-containing protein (JFK), is the substrate-recognition component of an SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. It specifically recognizes p53/TP53, promoting its ubiquitination and degradation. FBXO42 is also involved in the ubiquitin-proteasome system that may play a role in the pathogenesis of Parkinson's disease (PD). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438882
Aligned: 18 rows
Threshold Bit Score: 59.272
Created: 11-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #   #  ##  ##    # ##   ### #      
Q6P3S6        47 MSELPEEVLEYILSFLsPYQEHKTAaLVCKQWYRLIKG 84   human
XP_002738009  13 INLLPEEIVERILSYLsPYDQLKQGsLVCKLWHRLIQG 50   Saccoglossus kowalevskii
XP_002614026  12 VNELPEEVLERILLFLsPYGQYKTAaLVCKLWRRLIKG 49   Florida lancelet
PVD36954      12 FGNLPEEILELIFSYLsPYGDFKRAmLVCKLWHRILSD 49   Pomacea canaliculata
XP_013385258  13 IDDLPEEILEHILWYLsPYKDFKSAlQVCKAWNRVVKG 50   Lingula anatina
Q9W281        24 LNVLPDEILEFIFTYLpPYGDLEHCsLVCKRWHAIVKN 61   fruit fly
CDW58845     489 VEDFPDHILELIFSFLsPYAELDACmCVCKRWYHMVKK 526  human whipworm
EFX84204       1 IQNLPTEVLEYILGLVsPYSDLQSCkLVCKRWLEIVQD 38   common water flea
RDD42399       1 MENLPEEILERILSYLsPYDDMLSAaQVCVQWSRLVDG 38   Trichoplax sp. H2
XP_019544045   3 IENLPNELLEKIFRYL-SADDLENAaLVCLAWKDIILT 39   Asian tiger mosquito

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