2CS1


Conserved Protein Domain Family
HMG-box_PMS1
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cd21985: HMG-box_PMS1 
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high mobility group (HMG)-box found in PMS1 protein homolog 1 (PMS1) and similar proteins
PMS1, also called DNA mismatch repair protein PMS1, is probably involved in the repair of mismatches in DNA.
Links
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Statistics
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PSSM-Id: 438801
Aligned: 7 rows
Threshold Bit Score: 101.082
Created: 8-Apr-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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putative DNA
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:
Scroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1          ## #####  ##      #           ##  #  ##      #   #  #   #  #           
2CS1_A         7 GIKKPMSASALFVQDHRPQFLIENPkTSLEDATLQIEELWKTLSeEEKLKYEEKATKDLERYNSQMKRAIEQE 79   human
P54277       570 VIKKPMSASALFVQDHRPQFLIENPkTSLEDATLQIEELWKTLSeEEKLKYEEKATKDLERYNSQMKRAIEQE 642  human
CCQ71545     566 IIRKSKSAFEHFIQEYRSKFVSENPrCSMKDILLKIEEQWKNLNeEEKQEYELKAARDLERYNREANKAMQQA 638  chicken
XP_007888330 563 TIRKALSPSALFMQETRLKLLAENPkTSLQDISVELEDMWKNLNeEEKKKFEEKAVKDLDRYNSQLKRVQTSH 635  elephant shark
XP_005996597 575 IIRKPMSASDTFIQEARPRILAETPaASVQEVSKKVDKMWKNLSeEEKKKYEEKAAKDLERYNMQTKKAMEQC 647  coelacanth
CAD43440     525 SVRQPSSAFSLFEQDTRSQVLQENPkASPQDVTAAAKERWESLGeEDRKKYEGKAEKSLNAYNLQRKRAAEGG 597  zebrafish
XP_020788944 539 GVRAPVSPAALFEKETRAEIITQNPkASLHEINESVRERWKTLSqEEKRRFEDKAQKQADLHEQAKSASAETP 611  great blue-spotted mu...

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