Conserved Protein Domain Family
Zn-C2H2_CALCOCO1

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cd21967: Zn-C2H2_CALCOCO1 
C2H2-type zinc binding domain found in calcium-binding and coiled-coil domain-containing protein 1 (CALCOCO1) and similar proteins
CALCOCO1, also called calphoglin, or coiled-coil coactivator protein, or Sarcoma antigen NY-SAR-3, functions as a coactivator for aryl hydrocarbon and nuclear receptors (NR). It is recruited to promoters through its contact with the N-terminal basic helix-loop-helix-Per-Arnt-Sim (PAS) domain of transcription factors or coactivators, such as NCOA2. During ER-activation CALCOCO1 acts synergistically in combination with other NCOA2-binding proteins, such as EP300, CREBBP and CARM1. It is involved in the transcriptional activation of target genes in the Wnt/CTNNB1 pathway. It functions as a secondary coactivator in LEF1-mediated transcriptional activation via its interaction with CTNNB1. In association with CCAR1, CALCOCO1 enhances GATA1- and MED1-mediated transcriptional activation from the gamma-globin promoter during erythroid differentiation of K562 erythroleukemia cells. CALCOCO1 contains a C2H2-type zinc binding domain.
Statistics
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PSSM-Id: 412013
Aligned: 5 rows
Threshold Bit Score: 64.442
Created: 27-May-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:C C H HClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structure evidence that Homo sapiens CALCOCO2 (2MXP) binds a Zn2+ ion through its C2H2-type zinc binding domain.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #               #   #   
Q9P1Z2       654 KECPICKERFPAESDkdALEDHMDGHFFF 682 human
EMP30226     582 RECPICKERFPLECDkeALEEHVDSHFFF 610 Green sea turtle
XP_014349328 611 KECPICKERFPLEFDrdALEEHIDSHFFF 639 coelacanth
XP_029451053 665 KECPICKQRFPPQCDtnALEQHVDSHFFF 693 two-lined caecilian
XP_007907857 771 KECPICKQHFPSEYKnqALEDHIDSHFFF 799 elephant shark

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