3VJ6


Conserved Protein Domain Family
IgC1_MHC_1b_Qa-1b

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cd21820: IgC1_MHC_1b_Qa-1b 
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Class Ib major histocompatibility complex (MHC) immunoglobulin domain of Qa-1b; member of the C1-set of Ig superfamily (IgSF) domains
The non-classical mouse MHC class I (MHC-I) molecule Qa-1b is a non-polymorphic MHC molecule with an important function in innate immunity. It binds and presents signal peptides of classical MHC-I molecules at the cell surface and, as such, act as an indirect sensor for the normal expression of MHC-I molecules. This signal peptide dominantly accommodated in the groove of Qa-1b is called Qdm, for Qa-1 determinant modifier, and its amino acid sequence AMAPRTLLL is highly conserved among mammalian species. The Qdm/Qa-1b complex serves as a ligand for the germ-line encoded heterodimeric CD94/NKG2A receptors expressed on natural killer (NK) cells and activated CD8+ T cells and transduces inhibitory signals to these lymphocytes. Thus, upon binding, Qa-1b signals NK cells not to engage in cell lysis. The molecular basis of Qa-1b function is unclear.
Statistics
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PSSM-Id: 409625
Aligned: 4 rows
Threshold Bit Score: 219.639
Created: 14-May-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                           # #                          ## ###     # #               
3VJ6_A    180 QRSDPPKAHVTHHPRSEDEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKEQYYTC 259 house mouse
AAD31381  200 QRSDPPKAHVTHHPRSEDEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKEQYYTC 279 Mus musculus
AAD12244  200 QRSDPPKAHVTHHPRSEDEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKEQYYTC 279 Mus musculus
NP_034528 200 QRSDPPKAHVTHHPRSEDEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKEQYYTC 279 Mus musculus
Feature 1                       
3VJ6_A    260 HVYHEGLPEPLTLRWEPP 277 house mouse
AAD31381  280 HVYHEGLPEPLTLRWEPP 297 Mus musculus
AAD12244  280 HVYHEGLPEPLTLRWEPP 297 Mus musculus
NP_034528 280 HVYHEGLPEPLTLRWEPP 297 Mus musculus

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