Conserved Protein Domain Family
ABC-2_lan_permease-like

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cd21809: ABC-2_lan_permease-like 
lantibiotic immunity ABC transporter permease (also called ABC-2 transporter permease) subunit and similar proteins
This subfamily contains lantibiotic ABC transporter permease subunits which are highly hydrophobic, integral membrane proteins, and part of the bacitracin ABC transport system that confers resistance to the Gram-positive bacteria in which this system operates, particularly to type-A lantibiotics. Lantibiotics are small peptides, produced by Gram-positive bacteria, which are ribosomally-synthesized as pre-peptides and act by disrupting membrane integrity. Genes encoding the lantibiotic ABC transporter subunits are highly organized in operons containing all the genes required for maturation, transport, immunity, and synthesis. For example, in Lactococcus lactis, the lantibiotic nisin is active against other Gram-positive bacteria via various modes of actions; however, its self-protection against the pore-forming nisin is mediated by the ABC transporter composed of NisF, NisE and NisG; the NisG permease subunit transports nisin to the surface and expels it from the membrane. This family includes mostly uncharacterized transport permease subunits that transport lantibiotics to the surface and expel them from the membrane.
Statistics
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PSSM-Id: 409634
Aligned: 105 rows
Threshold Bit Score: 77.624
Created: 28-Apr-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1: N-terminal hydrophilic motif [structural motif], 9 residue positions
Conserved feature residue pattern:[ST] [DE] x [LIVFYM] [RK] x [RK] x [ST]Click to see conserved feature residue pattern help
Evidence:
  • Comment:this hydrophilic region may have a role in the interactions with the ATP-binding protein of the ABC-type transport complex

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #########                                                                       
WP_009710165   7 AERLKMKRTwl----pvLVLLGPAGILLSMLVDFGlrrdyllq-----qpldswvILVKEVSALLPLAMLLGStlLASLM 77  Kroppenstedtia ...
WP_055245038   6 LEFYKCRRRk------iVLMCAAVLAVELIWMEAFftrqdted----lkwswillLYNLAMVDTIILPIGVAT--LASRN 73  Anaerotruncus c...
Q5WNX1         7 CELSKLKRSkm----vlISVAGVLSTPLLMLIEALqthfdkpe----iiftlsdiYSDSVLYIMLLVNMMIYVa-IAAYL 77  Enterococcus fa...
WP_133236099  10 SEWLKRKRSla----swLVICGAFFTPLIITTSKIvrhsmlasagrspqywenlwKISWESMAVFLLPLGAIL--ASSLI 83  Mucilaginibacte...
WP_057953406  13 AEYMKTKKTwa----fwLSVFGGILIPAIMFLVVRshpeivsnrm-snmpwylflKYNWQSVASFLLPLYVVL--VTSLV 85  Salinivirga cya...
WP_114236840   9 SELLKTKRTas----fwLSLLGAGFIPAIYLIAYIlkpdgasrql-geapwnvhfFMGWQGVGFFLLPMFVVL--LCALV 81  Chitinophagaceae
WP_093868590  13 NELIKLKRTfa----fwLTVISALIIPLLFFIVYAvkhaklapga-gvnpwdkymLNQVKNSIPFFVPIFIVL--ITSLI 85  unclassified Te...
OJV22548      10 SELIKLRRTfa----fwLTVLGAAIIPLTMLITYVynwhmfipa--sganpwaemYARAFNGIILFMPLYIIL--LIGLT 81  Dyadobacter sp....
WP_116093557   7 LEIFKMKRRkf----llPVLLITLVGLLWFSVIATkelnitdv-----qnglnmfVSNLLTVNSMIYPILIGI--VCSRL 75  Staphylococcus ...
RYY57988       9 SELIKTKRSssfwlsliGAGVIPVIFLLIYLIRPDkvvnqmka-----mpwethfFQGYQQFSSLLLPIFVIL--ICSQI 81  Chitinophagacea...
Feature 1                                                                                        
WP_009710165  78 VGVEHqaSAWKHLMTLPLSRfRIYLGKGIQMTGWLLLAGILMVPAFALLWTWFELgkevp--------wasflKGGLYPV 149 Kroppenstedtia ...
WP_055245038  74 CELEHkgNTWKFLKTITRPK-QLYAAKLAWGALVLAALLIIRSGIFLAVGIVQGFqgdip--------wgrfgLFTLISW 144 Anaerotruncus c...
Q5WNX1        78 YSREYteNTLKTILPIPISRtKLLIGKFCTLLLWIVMLTLVTWAGIFIVCGLYHVvftl----------egysLLVAISW 147 Enterococcus fa...
WP_133236099  84 TQLEYknNSWKLLHTTPQSYrVIFLAKLSVILVMMLQFLVLFNIGIYFSGVLPGLlfgvpyprq-pipylhflAENGRYF 162 Mucilaginibacte...
WP_057953406  86 VQIEHkaNAFKKMLTLPYSRaSFYVSKILVILYYVALTHIIFIFAIAIFGLLLGAlipetmflskpipwvmmiKQITKSF 165 Salinivirga cya...
WP_114236840  82 TQIEFknNTWKQVYASPQSYgQIYFSKLLIIHTMIIFFFIAFNLFMLGTGIVSALvhkqlaflkssfdvqklvELNAKMY 161 Chitinophagaceae
WP_093868590  86 IQVEHkaTGIKHLFALPIPKwSVYFGKLSIVLFSIISTYVYFFVAILFFGTLLGVfysdlafldfqpdylkyiKMLGVSF 165 unclassified Te...
OJV22548      82 YHLEYkaNAWKHLFVLPVSKrALFLGKYLIVLTMVFSFMTLFLLFTWIAGGLVGFykaelgfrrhnpdvftvlDFSIKVL 161 Dyadobacter sp....
WP_116093557  76 VDIEHkgNTFQLLNTSKQSMfNLFISKICIATVILFIIDLIQLFTIIFMAQSNSItldm----------slmsKFVLSFL 145 Staphylococcus ...
RYY57988      82 PQIEYknNTWKQVFASPQSIgNIFFSKYIAIILMILFLFLMYNIFMILAAVIPSFihkeisflkhpinwaqlfELNLKTF 161 Chitinophagacea...
Feature 1                                                                                        
WP_009710165 150 LAVLPVAMLQLWLSVV------IRNQA--------LPVFIGVVGSLFNRMLPAWMPWAYPGNSIpar----------iar 205 Kroppenstedtia ...
WP_055245038 145 AVSMMVYALQQGLSLR------FLNQAaalv-cgiAGSFLGILSMLFPPALTRCVPWGYYGLLTlvgmdwnpatrvtafh 217 Anaerotruncus c...
Q5WNX1       148 LPKFLFGGILMFLTTSpfvfiaFKTKGfvap-viaSAVIVMGSVALSNQELGALYPWTATFFLIdgr----------ies 216 Enterococcus fa...
WP_133236099 163 IACLPIIALQYLISLR------FKNFLvpv---gvGLVIWILSIAVLHWPYGHWIPYTYCGFNYlkd-----------qa 222 Mucilaginibacte...
WP_057953406 166 LASLGIVAIQYLLSIR------FRNFIkpi--gfgFAATIAGTIMQLGWKYVDYWPWALPAKVSpnim---------qga 228 Salinivirga cya...
WP_114236840 162 ISTMGIAAIQYWLSLR------FKNFIvpmg-iglALLIAAIVATNLGWEHIYKVPFAQPGLTLryv----------sqp 224 Chitinophagaceae
WP_093868590 166 IASLGIVGIQFWLSFR------FKNFIvpl---svGMVFVILGLIAFQAPESIYFPYSYNILSIslgd---------qmp 227 unclassified Te...
OJV22548     162 IAVLAIISIHFWLGLK------IRNLVsvl--gigLAGMALAILMNGRGGYADFFPYAYPIMLMnyv----------pss 223 Dyadobacter sp....
WP_116093557 146 IASFFLILIHTALSLF------FEKQSisivlaliGSFLGLVTGGMLPTFIKILLPWQYYSLLNpvhkkms--rqgflya 217 Staphylococcus ...
RYY57988     162 ISLLGIISIQYWLSLR------LKNFIapig-iglALLIGSMMAFGFGWEHVFKLPFAFPLLTLvnlp--------kdgs 226 Chitinophagacea...
Feature 1                                      
WP_009710165 206 EGNNPEVWVPVGIGVGILLLLLGGLHFSRR 235 Kroppenstedtia eburnea
WP_055245038 218 WQWPEPADLILLLLWAAVFLIVGRTLFVRK 247 Anaerotruncus colihominis
Q5WNX1       217 TGYPLALAIGIIILVSAVGFFMTFHHFKKE 246 Enterococcus faecalis
WP_133236099 223 KHHQQFPPIPFALGYFTLFAVIAYILYLHQ 252 Mucilaginibacter psychrotolerans
WP_057953406 229 SSEIFTMHEWISIGYFILFMSIGILYFSYR 258 Salinivirga cyanobacteriivorans
WP_114236840 225 VKGWLQPHEWNSIIAFVIFTIGGFLDVIYK 254 Chitinophagaceae
WP_093868590 228 QTFGISSVTVYSILCFILTSVLGYLDVKRL 257 unclassified Tenacibaculum
OJV22548     224 PDAYLERFHWVSLTYFALFSLLALSKFVKS 253 Dyadobacter sp. 50-39
WP_116093557 218 QNDHYFIYLSIVILLIIIAFFVIKKSIQRR 247 Staphylococcus felis
RYY57988     227 SGHALLNHEWNSIGYFVFFTILAFLDMKYR 256 Chitinophagaceae bacterium

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