Conserved Protein Domain Family
Rad21_Rec8_M_Rec8

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cd21794: Rad21_Rec8_M_Rec8 
Middle HEAT-repeat binding domain found in Homo sapiens meiotic recombination protein REC8 homolog and similar proteins
Rec8, also called cohesin Rec8p, is a meiotic recombination and sister chromatid cohesion phosphoprotein of the Rad21p family conserved from fission yeast to humans. It is required during meiosis for separation of sister chromatids and homologous chromosomes. Proteolytic cleavage of Rec8 on chromosome arms by separin during anaphase I allows for homologous chromosome separation in meiosis I, and cleavage of Rec8 on centromeres during anaphase II allows for sister chromatid separation in meiosis II. This model corresponds to a small region in the middle of Rec8 that shows high sequence similarity with the HEAT-repeat binding domain found in both the middle of Saccharomyces cerevisiae sister chromatid cohesion protein 1 (ScScc1p) and Homo sapiens nuclear matrix protein 1 (NXP-1), which consists of short helices and two long extended segments.
Statistics
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PSSM-Id: 439296
Aligned: 43 rows
Threshold Bit Score: 54.2389
Created: 12-Mar-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative
Feature 1:putative HEAT-repeat binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structure of human Scc1 in complex with HEAT-repeat containing protein Stromal Antigen 2 (SA2)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ###   ########  #  ##           ########             #  ######             
O95072       298 RRRRRRRLLFwDKETQISPEKFQEQLQt--------RAHCWECPMVQPpert---irgPAELFRTPTlsgw--------- 357 human
KXJ09751      41 RPRRKRKLAI-DFSIKLTGIAMRRNFNn-------vDTLKKRKICDIPkl------psLRDLFXRPAtsvvn-------- 98  Exaiptasia pallida
XP_031557062  45 KRKRKRRLAI-DFNIKLTGTIMKKNFNn-------vDSLKKKKVYAIPrv------qsALELFSSPTtsvl--------- 101 Australian red ...
XP_022814512 228 KRRKIRKLII-DKKTKISSNHFRARIEnplvelrceDSSDDIIFVRVP----------VEEYFRRPChggnkii----sn 292 Spodoptera litura
KOX75995     127 KRSKKRRKLF-DRQTKLSNTLMRKYIQnv------tAHTIKEQPWFMPtl------psAKEYLRQPStkifnk------l 187 Melipona quadri...
XP_028406519 253 RQRRKRGQPL-DKIPTLSDAKLKRNKMn-------vRDTLRDQVIDLPlr------isVQELFNNPCrqel--------- 309 Dendronephthya ...
XP_012224758 314 RRRRSKKFII-DKRMILKSDVLRKWQQ---------NTKIYCVDIRYMiqkpnqirsnVKDLFEQPArrw---------- 373 Argentine ant
XP_028049962 149 KKHPKKSIII-DERITLSDKECQKWRQn--------IKICCKQSVDKPlvr----kvsAKRLLELPLclttrh-----sr 210 pharaoh ant
EZA50438      24 KKQPKRGKVI-DKKIRLEDKSLKEWHQn--------TRIHCKSQLDLPqvhr---pppAMELFDRPShqpkr-------- 83  clonal raider ant
KZC11253     240 PKKGRRKIVFdRKNNKLSAAVMKKLINn--------VASHTGPSQVRTtl------lsAAELLNRPStilrstskisrat 305 Dufourea novaea...
Feature 1               ## ######
O95072       358 lppeLLGLWTHCAQPP 373 human
KXJ09751      99 hnshFRRLWDKNAKIR 114 Exaiptasia pallida
XP_031557062 102 seahFIKHWKANAFVK 117 Australian red waratah sea anemone
XP_022814512 293 fgdgISVLFGRNLGVV 308 Spodoptera litura
KOX75995     188 wgetLTKFFSQHFIKP 203 Melipona quadrifasciata
XP_028406519 310 rnppFFRYWRENATTS 325 Dendronephthya gigantea
XP_012224758 374 -gasLKQLFDNHITGP 388 Argentine ant
XP_028049962 211 wntkLHDLFVNHTIGP 226 pharaoh ant
EZA50438      84 waskLYDLFADNVRGP 99  clonal raider ant
KZC11253     306 wgpkLTGLFSRHLNVH 321 Dufourea novaeangliae

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