Conserved Protein Domain Family
CTD_Jhd1-like

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cd21783: CTD_Jhd1-like 
C-terminal domain found in Drosophila melanogaster JmjC domain-containing histone demethylation protein 1 and similar proteins
JmjC domain-containing histone demethylation protein 1 (Jhd1), also called lysine (K)-specific demethylase 2 (KDM2), or [Histone-H3]-lysine-36 demethylase 1, is a histone demethylase (EC 1.14.11.27) that specifically demethylates 'Lys-36' of histone H3, thereby playing a central role in the histone code. Jhd1 consists of two Jumonji domains (JmjN and JmjC), a CXXC zinc-finger domain, a plant homeodomain (PHD) finger, an F-box domain, followed by an antagonist of mitotic exit network protein 1 (AMN1) domain. This model corresponds to a small conserved region in Jhd1 between the JmjC domain and the CXXC zinc-finger domain, which has been called the C-terminal domain by literature.
Statistics
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PSSM-Id: 412024
Aligned: 16 rows
Threshold Bit Score: 102.004
Created: 6-May-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9VHH9        399 THLTHHELFGLKEIVMYLYDLPPqKKNVPSLVlDPVALIKDVRSLVERHCKDQQDLAITGVSVLKSP 465  fruit fly
TRY74423      397 IHLTPHEIFGMKAIVMYLHALAVsKKSVPVLLdQPVNLIRDIRVIVNEHKSDDPQLSISGKPVFYWP 463  Tigriopus californicus
XP_023331806  370 QHLTPQELYGLKAIVMFIHALPVtRKNVPSLIaDPVSLIKDIRTIVETHKQDDPEQAVSGKPLLFWT 436  Eurytemora affinis
XP_023333193  372 PHITQQELRGLKSTVLYLHSLPVnKKNVPSFIkDPVSLIRDIRIIVEVHKNDKSERAINGRPLLYWP 438  Eurytemora affinis
ODM98913      391 VALSPQELLGLKAIVLYLHQLPIqRKNVPALIyDPVALLRSIKQIVEKHRYDNPAKAVTGRPILIWP 457  Orchesella cincta
XP_026462710  324 VHLTKMELHGLKEIVTFLHLLPNhKKSLPELLrNAVALIRDVRKVVELHFCDNAELAITGRPVLTPL 390  cat flea
TRY62626      298 VHLTLSELHGLKFIIMYLHHLPNsKKSVPLMLpDPISIIKDVRELVLEHNQDCPEAAATGRYIINWG 364  Tigriopus californicus
VVC24414      376 LHFTKQELHGIKAMVTYLHNLPShKKNVPPLIkSAIDLIRDVAFVISKHKNDKPEDAITGIPILQIQ 442  Cinara cedri
XP_023336351  390 VHLTQEEIRGLKFIVMFLAKTPAeKRCVPDIIpEPGRLVKCVRDIIKEHEDDCPEAAVTGTYILRWT 456  Eurytemora affinis
VVC30979      353 LHITKPEYGGIIAIVQYLFFLPHrERNIPPSI-DAIQLVSNFAEWRERHLDDIPERAADGISFLKKL 418  Cinara cedri
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