Conserved Protein Domain Family
GH2-like_DHX8

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cd21691: GH2-like_DHX8 
GIPC-homology 2 (GH2)-like domain found in DEAH box protein 8 (DHX8) and similar proteins
DHX8 (a human homolog of yeast Prp22), also called RNA helicase HRH1, is an ATP-dependent RNA helicase involved in pre-mRNA splicing as a component of the spliceosome. It facilitates nuclear export of spliced mRNA by releasing the RNA from the spliceosome. This model corresponds to the GH2-like domain that shows high sequence similarity with the GH2 domain found in GIPC (GAIP C-terminus-interacting protein) family of proteins, which mediate endocytosis by tethering cargo proteins to the motor myosin VI.
Statistics
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PSSM-Id: 409668
Aligned: 48 rows
Threshold Bit Score: 96.8457
Created: 10-Apr-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q14562         25 LEYLSLVSKVCTELDNHLGI---NDKDLAEFVISLAEKNt-TFDTFKASLVk--nGAEFTDSLISNLLRLIQTM 92   human
XP_007512814   18 LQHLSLINKVTKELDKNLGV---NDKTLAEFIVDIAKASkfDPKTFFNELQk--nGAELPEPFANELVGTIERL 86   Bathycoccus prasinos
KFH09615        4 LERLSVISRITTELQNHWGV---NDRDLAEFVVHLGEEAs-SLDEFREQLQe--nGAAVSTSLAVSLYTTIQKL 71   Toxoplasma gondii VAND
XP_012847984    9 LEYFSLMSKVCTELETHLGFrgeALALLAEFVIDIGRNCa-TAEELVANLKe--kNADLPDYLVGTLFAVIRAI 79   spotted monkey flower
OQR87563        4 LQELSLISKVCSELESHLGM---SERTLAEFIIDLARGSk-DGKKFYAELAa--nGAEFPMTFALHLYQLIHTM 71   Achlya hypogyna
PNW79554        8 LLYLQTVNKVAQEIENHLQI---SDATVAEFIVETAKDAg-NVDKFKKAMQemglGAALNDVLIERFWNIIQAL 77   Chlamydomonas reinh...
PRW58375        7 LQYLSLVSKLTTELENHLGI---ADKTLAEFIVELSKGKn-SSKEFRLVLRe--nGADMPDSLVETLWAIIQKM 74   Chlorella sorokiniana
XP_024366678    7 LEYLSLVSKVCTELEAHIGC---SDKTLAEFIIDLAQKCe-TVEQFGKSLKs--nGAEMPEYFVKTLLTIIHAI 74   Physcomitrella patens
GBF98973        7 LSDLQVVSRVTKELENHLNIagdQGKTLAEFVIDIARSQk-SVDGFKAELAa--lDSGVPDALVERLWTIIHAL 77   Raphidocelis subcap...
PXF39943        4 LKKLSLVTRICTEIENHLGV---KDKDLAEFLIDIAKKSt-DEKCFRDAVAeecgGETLPTALTSSIFRSVFRI 73   Gracilariopsis chorda
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