5V6E,5V6B


Conserved Protein Domain Family
GH2_like

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cd21690: GH2_like 
GIPC homology 2 (GH2) domain-like family
The GIPC (GAIP C-terminus-interacting protein) family of proteins mediate endocytosis by tethering cargo proteins to the motor myosin VI. This model represents the C-terminal GIPC homology 2 or GH2 domain (plus the linker to the PDZ domain located N-terminally of GH2), which mediates the interaction with myosin VI and is involved in homodimerization in the autoinhibited state. The family also includes DEAH box protein 8 (DHX8) and similar proteins. DHX8 (a human homolog of yeast Prp22), also called RNA helicase HRH1, is an ATP-dependent RNA helicase involved in pre-mRNA splicing as a component of the spliceosome. It facilitates nuclear export of spliced mRNA by releasing the RNA from the spliceosome. DHX8 contains a GH2-like domain at the N-terminus, which shows high sequence similarity with the GH2 domain found in GIPC proteins.
Statistics
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PSSM-Id: 409667
Aligned: 5 rows
Threshold Bit Score: 85.9867
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5V6E_A      9 EKAIEKVDDLLESYMGIRDTELAATMVELGKDKrNPDELAEALDerlgDFAFPDEFVFDVWGAI 72   house mouse
5V6B_A    215 EKAIEKVDDLLESYMGIRDTELAATMVELGKDKrNPDELAEALDerlgDFAFPDEFVFDVWGAI 278  house mouse
PVC50440   10 LSALAKVTEILKNYLDVDQPELAEFIIFLAKKAkDVEDFNKLLDe--nEANMSYDFVNQLYRTI 71   Theileria orientalis
Q14562     28 LSLVSKVCTELDNHLGINDKDLAEFVISLAEKNtTFDTFKASLVk--nGAEFTDSLISNLLRLI 89   human
P24384     75 SPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSkSITEFQEQLNl--mQSGLDNETIFKIYQIA 136  Saccharomyces cerevisiae S288C
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