5TOD


Conserved Protein Domain Family
SMP_C2CD2L

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cd21683: SMP_C2CD2L 
Click on image for an interactive view with Cn3D
synaptotagmin-like mitochondrial-lipid-binding protein (SMP) domain found in C2 domain-containing protein 2-like (C2CD2L)
C2CD2L, also called phospholipid transfer protein C2CD2L, or C2CD2-like, or transmembrane protein 24 (TMEM24), is a lipid-binding protein that transports phosphatidylinositol, the precursor of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2), from its site of synthesis in the endoplasmic reticulum to the cell membrane. It is a Ca2+-regulated component of endoplasmic reticulum (ER)-plasma membrane contacts in mammalian neurons. This model corresponds to the SMP domain of C2CD2L, which may be implicated in lipid transport.
Statistics
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PSSM-Id: 439239
Aligned: 17 rows
Threshold Bit Score: 287.371
Created: 24-Apr-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
putative lipid
Conserved site includes 27 residues -Click on image for an interactive view with Cn3D
Feature 1:putative lipid binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  ##   #   #                   #    #                    #    # #
5TOD_F        13 GVRGLLASLFAFKSFRENWQRAWVRALNEQAcRNGSSIQIAFEEVPQLPPRASISHVTCVDQSeHTXVLRCQLSAEEVRF 92  human
NP_001135635  50 GALGLLTALFAFPSVRESWSRAWAKALNSEAaRNQSSLQVLFEESTYLQPNTHISHVSCTEHSdSSMVFLCTFSADPIRF 129 tropical clawed...
XP_006119780  72 GARGLLASLFAFRSFRENWQRAWVRALNEQAcRHGSSVQITFEENPQLPAAVNISHVTCTDQAdHSMVLHCHLSANAVKF 151 Chinese soft-sh...
XP_016159295  62 GARALLAALLALRSLREQWQRAWVRALNSQArRHGSSVQITFEEGHQLPQAANISCVTCKGQSdHGIVLCCHLSAEAVKF 141 collared flycat...
XP_013127769  84 GVKGLLTSLFSFKSFRELFQRTWVKALNEQAcRHGSSIQITFDSSLQISAASAIESVSCTDQSaNRMILHCNCSVDRVTL 163 Nile tilapia
XP_015193045  91 GVKGLLSSLFAFKSFRENWQRTWVRALNEQAcRNGSSIQITFEDSLQLPSSASISHVTCTDQSeQSMVLQCHCAVDTVAF 170 spotted gar
O14523        84 GVRGLLASLFAFKSFRENWQRAWVRALNEQAcRNGSSIQIAFEEVPQLPPRASISHVTCVDQSeHTMVLRCQLSAEEVRF 163 human
AAI30099      75 GARGLLTALFGFPSVRESWSRAWAKALNSEAaRNQSSLQVLFEESTHLQPNSHISHVSCTEHSdSSMAFLCTLSADPIRF 154 African clawed ...
NP_001277409  48 GARALLAALLALRSLREQWQRAWVRALNSQArRHGSSVQITFEEGPQLPPAANISCVTCKGQSgHSMVLCCHLSAEAVKF 127 chicken
XP_023648247  28 GLKSLLSSLLSFEPMRENCRQAWVQALNKQAcRPGSSMRINFGENLPFPASASIDCITYAGQSaHSMVLHCNCTVETVTF 107 Paramormyrops k...
Feature 1         #                   # #   # #           # # #         #                      # 
5TOD_F        93 PVSVTQQSPAAVSXETYHVTLTLPPTQLEVNLEEIPGEGLLISWAFTDRPDLSLTVLPKLqarergeeQVELSTIEELIK 172 human
NP_001135635 130 PVSVTQESPAAVSMNTYQVLLTLHQAQIEVRLEELPQEGLLVSWGFKEHPDITLQVTPRQslqs-negGAELCTLQDLIK 208 tropical clawed...
XP_006119780 152 PVSVTQQSPAAVSMDTYQVTLALLQAQVEIRLEEMKNEGLLVSWTFKDRPDLNLSVVPKLhprekndgKVDLSTIKDLIE 231 Chinese soft-sh...
XP_016159295 142 PVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDFLVLPRLelpa-derRADLSTIKDLIE 220 collared flycat...
XP_013127769 164 PVTVTQQSPAAISMDTYQITIAPVVAKVVACLEEVEDEGLLISWSLSKQPSFSLTVSPCKlqrrgtegEADIDTIKGLIE 243 Nile tilapia
XP_015193045 171 PVTVTQQSPAAVSLDTYQVAMAPMEAQLVICLEEVEEEGLLVSWTFSQQPLLSLTVTPRRiqkdvndgKVDLGTIGELVR 250 spotted gar
O14523       164 PVSVTQQSPAAVSMETYHVTLTLPPTQLEVNLEEIPGEGLLISWAFTDRPDLSLTVLPKLqarergeeQVELSTIEELIK 243 human
AAI30099     155 PVSVTQESPAAVSMNTYQVFLTLHQAQIEVRLEELPQEGLLVSWGFKEHPDITLQVTPRQslqs-segGAELCTLQDLIQ 233 African clawed ...
NP_001277409 128 PVSVTQQSAVDVSVDTYHVTLALLQAQVEIHLEEIQNQGLLVSWSFKDRPDLDLSVLPRLqpce-negKADLSTIKDLIE 206 chicken
XP_023648247 108 PVTVTQQSPATVSVDTFQVTIAPVQAQMVVHLEDMDKEGLLASWTFSQQPLLHLTVVPCQvqqe-vgrEFDLNVVGELVK 186 Paramormyrops k...
Feature 1         ##    # ####    
5TOD_F       173 DAIVSTQPAXXVNLRAC 189 human
NP_001135635 209 DALLSAQPAMVFNLKAH 225 tropical clawed frog
XP_006119780 232 DSIVSTQPAMMVNLKAC 248 Chinese soft-shelled turtle
XP_016159295 221 DTIVSTKPAMMVNLMAC 237 collared flycatcher
XP_013127769 244 DTLFSTQPAMVLNLRTS 260 Nile tilapia
XP_015193045 251 DTIVSTQPAMIINLRAC 267 spotted gar
O14523       244 DAIVSTQPAMMVNLRAC 260 human
AAI30099     234 DALLSAQPAMVFNLKAH 250 African clawed frog
NP_001277409 207 DTIVSTQPAMMVNLKAC 223 chicken
XP_023648247 187 STIINSQPAVILCLRTS 203 Paramormyrops kingsleyae

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