Conserved Protein Domain Family
SMP_ESyt3

?
cd21681: SMP_ESyt3 
synaptotagmin-like mitochondrial-lipid-binding protein (SMP) domain found in extended synaptotagmin-3 (E-Syt3) and similar proteins
Extended synaptotagmin-3 (E-Syt3), also called Chr3Syt, binds glycerophospholipids in a barrel-like domain and may play a role in cellular lipid transport. It tethers the endoplasmic reticulum to the cell membrane and promotes the formation of appositions between the endoplasmic reticulum and the cell membrane. E-Syt3 consists of an N-terminal endoplasmic reticulum (ER)-membrane anchor, a central SMP-domain, and three C-terminal cytoplasmic C2-domains. The ER-membrane anchor and C2 domains are required for tethering, and the SMP domain may be implicated in lipid transport. This model corresponds to the SMP domain.
Statistics
?
PSSM-Id: 439237
Aligned: 4 rows
Threshold Bit Score: 338.334
Created: 24-Apr-2020
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
 
putative lipidputative
Feature 1:putative lipid binding site [chemical binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens Synaptotagmin-2 (4P42) binds lipids.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                           #    #   #   #      #         #    #                        #
A0FGR9       116 ERVEWANKIISQTWPYLSMIMESKFREKLEPKIReKSIHLRTFTFTKLYFGqKCPRVNGVKAHTNtcNRRRVTVDLQICY 195 human
XP_422118     96 ERVEWLNKVLEQAWPYFGTIMEKTFKEVLEPKIRaKSVHLKTCTFTKIQFGeKCPRINGVKVYTKeiDRRQVILDLQICY 175 chicken
Q5M7N9       157 ERVEWLNKVVGQMWPYIGMYVEKMFQDKVEPLVRsSSAHLKAFTFTKVHLGeKFPRINGVKSYTKnvDKREVILDLQLSY 236 tropical clawed...
XP_007901249 128 ERVEWLNKIVSQAWPYIGIYLEKLFKDRIEPSICgSNVYLKTFIFSKLHFGeKSPKIAGVKVYTDevDKRQVIIDLQISY 207 elephant shark
Feature 1             # #            #     #                  # #         #                      
A0FGR9       196 iGDCEISVELQ-KIQAGVNGIQLQGTLRVILEPLLVDKPFVGAVTVFFLQKPHLQINWTGLTNLLDaPGINDVSDSLLED 274 human
XP_422118    176 vGDCEIHMDIS-KFNLGVKGVQLYGTLRVILEPLLTDAPFIGAVTLFFMQKPHLEFNWAGMSNLLDvPGINVMSDSLIQD 254 chicken
Q5M7N9       237 nGDVEINVEVKkMCKAGVKGVQLHGTLRVILAPLLPDLPFVGAVTMFFIQRPHLDINWTGLTNVLEiPGVSDFSDSMIVD 316 tropical clawed...
XP_007901249 208 iGDCEINVEIKkVCKAGLKGVLLHGTLRVILEPLIGQMPLVGAVTLFFIRPPTLEINWTGLTNILDiPGVNEMSDTKILD 287 elephant shark
Feature 1        ##  ##  ####      
A0FGR9       275 LIATHLVLPNRVTVPVKK 292 human
XP_422118    255 YIAARLVLPNRITVPLKK 272 chicken
Q5M7N9       317 MIASHLVLPNRFTVPLSS 334 tropical clawed frog
XP_007901249 288 AIASYMVLPNRFTCPLTS 305 elephant shark

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap