Conserved Protein Domain Family
SMP_TCB

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cd21678: SMP_TCB 
synaptotagmin-like mitochondrial-lipid-binding protein (SMP) domain found in the tricalbin (TCB) family
The tricalbin (TCB) family includes Saccharomyces cerevisiae TCB1-3 and similar proteins. They may play a role in membrane trafficking. This model corresponds to the SMP domain of TCB family proteins, which may be implicated in lipid transport.
Statistics
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PSSM-Id: 439234
Aligned: 59 rows
Threshold Bit Score: 157.721
Created: 23-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative lipid
Feature 1:putative lipid binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                             #  ##   #   #                       #    #                  
Q12466        174 ESLEWLNAFLDKYWpilEPSVSQLIVQQANEQMAtne----aiPKFITQLWIDELTLGvkpPRVDLVKTFQnt---asDV 246  Saccharomyces...
XP_013237526  135 ESAEWINYIVGRIWgvyEPVLSATLIDTVNEALEda------cPSFLSALKLTTFTLGsepPVILGFRRYPdt---pdDV 205  Mitosporidium...
PJF19427      107 ESAEWLNFIAVRLWtvlEPVISVKVTERVNAVLEea------cPSFLDSLMLTEFTLGssaPTILSARVHPkt---qpDV 177  Paramicrospor...
ORX59371      128 ESIEWLNFLLQKIWgtiEPVAAEMVPDIVDSVLKdf------cPSFLHSIRLTKFNLGseaPRLESVECFDnl---epEE 198  Anaeromyces r...
OUM69088      128 ESIEWLNFLLQKIWgtiEPVASEMVPEIVDSILKen------cPGFLHSIKLTKFNLGseaPRLESVECFDnl---eqEE 198  Piromyces sp. E2
EPR77700      111 EKLQWFNYVVERYWtvfEPMVSNFVLRYLNIIFEes------cPSFLSRLRVSEFTLGnisPFIKKVKFLNc-----aEN 179  Spraguea loph...
ORD97115      136 ETVEWLNYIIRQFWkvsEAPISSEIHSNVNEVLRkl------eVSGIKGLRLTECTLGtfpPEVDYISFYErk----dDA 205  Hepatospora e...
KFG26810      110 EKVDWMNEVTEKAWrfvESTLSKVILLRISTILRkv------kVPMVSDIRLDRFTLGgqaPVIEGIRIRQscr--dsLI 181  Nematocida sp...
OUM62853      209 ETLNWLNYILQKAWptaEPLIGSIVMDSVNGVLDdvitniglsNVGFDALKITEFSLGteaPKLMEMCPSTdt---dpNV 285  Piromyces sp. E2
XP_014155826  336 ETAEWLNAILDRVWhnfPRVAEKMVSDIIAPQLDan-----keMLALSKLELEDFDFGtraPNLTDLRVVHdepnefiFD 410  Sphaeroforma ...
Feature 1               #                         # # #                     # #   # #             
Q12466        247 VVMDWGIsftphdlcd-----msakqvrnYVNELAVVKAKIfg------iTIPVSVSDIAFKAHARVKFKLmt-pfPHVE 314  Saccharomyces...
XP_013237526  206 IHFEIRLafvprrstedvmyplrrgvahrKWSSQIVLAARFgssl--vgvDVPILVENISVEVHARIQLKLmp-apPVVK 282  Mitosporidium...
PJF19427      178 VHLDVEVcfipkdtdts---vatgdtsspQWNSKVVLNARMgkgr--lgvDVPVMLKEISIFGKLRLQLELgp-tvPFVN 251  Paramicrospor...
ORX59371      199 MQMIWHAsfipvtde-------enkydetKRTTEIQATAFVgndk--fqvPLNINVSNLLFEGKILLRVRFth-syPFIK 268  Anaeromyces r...
OUM69088      199 MQMIWHAsfvpvtre-------ediyddnKRKTEIQATAFLgtdk--fqvPLNINVSNLLFEGKILLRVNFsh-ryPYIK 268  Piromyces sp. E2
EPR77700      180 IVLEFDMgflptediksq-flddsdiqkpRYGSRIVIIARLgssvkgigiDVPISVTSVTFKGVLRVEMKLtn-diPFVE 257  Spraguea loph...
ORD97115      206 LAIEFSLsfiplqde------itqennqdKYNSCIQVNADInn-----fiSLPFLVRNLTFSAKFRVELYLkr-eiPMLK 273  Hepatospora e...
KFG26810      182 VDATMHFipsvseelqt--tlgtpgdnqiSWNSNITFTIRVggss--agiDMPVTLKNMSFRGSMRIKLNFty-daSVIE 256  Nematocida sp...
OUM62853      286 IKFTCLAkyepldtekls-khdieagekrASNICVSIKPKIg-------tYIPFKVTDIYFVGKLLFVITTme-tfPYVK 356  Piromyces sp. E2
XP_014155826  411 FDFDWDW----------------------DFEVKIRATKGV---------TMPLAVKDFMLHSKFRVFIHLtpdraPYCS 459  Sphaeroforma ...
Feature 1          # # #         #                         #  ##      # ####     
Q12466        315 TVNIQLLKvPDFDFVATLFgrsifnwEILAIPGLMTLIQKMAKKYMGPILlPPFSLQLNIPQL 377  Saccharomyces cerevisiae S288C
XP_013237526  283 IAQISLMSpPKVDFVLKPLks----lDIMDLPGLHSFINSMIDSVSSELAvTPNCITLNVDEI 341  Mitosporidium daphniae
PJF19427      252 KIQLGFLEtPRFDFILKPLks----fDLMDLPGLSNWISSSLTETINDTMvDPNMVVIPLRRS 310  Paramicrosporidium saccamoebae
ORX59371      269 TASVSFMEpPKVSCALKPLvg----iDLMSIPGVQEMTDITVKTVLKEVAlNPTTFDLDIENM 327  Anaeromyces robustus
OUM69088      269 TASVCFMEsPKLSCALKPLvg----iDLMSIPGVQQMTDIIVKTVLKEVAlDPQTFDLNLEKM 327  Piromyces sp. E2
EPR77700      258 VIDLSFLTqPFVDFSIKPLkr----iDIRYIPGISNWMTKIIENAFDKLMvAPNSLKLDLTDI 316  Spraguea lophii 42_110
ORD97115      274 TLKLQMLElPTVDFVLIPLkm----fDITKLPGISGIITNVINEQVTNLLlKPKFMEVNLDGV 332  Hepatospora eriocheir
KFG26810      257 GVEFSFLKqPIIEFNIVPLkm----lDIMDVPGLGTAIKKVIELGIAKEMlYPKRISVALKPK 315  Nematocida sp. 1 ERTm6
OUM62853      357 KVEFTFVEqPDVKWELKPLgg----mDVMAIPGLDPAVRKIVQTVISSIAlEPTRITIDVEEM 415  Piromyces sp. E2
XP_014155826  460 FAWVQMIQkPKLDVSVVPLv------EITAIPGLDALIKSTILGIITNLMvLPNRLELDLAEI 516  Sphaeroforma arctica JP610

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