Conserved Protein Domain Family
SMP_Mdm34

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cd21673: SMP_Mdm34 
synaptotagmin-like mitochondrial-lipid-binding protein (SMP) domain found in mitochondrial distribution and morphology protein 34 (Mdm34) and similar proteins
Mitochondrial distribution and morphology protein 34 (Mdm34), also called mitochondrial outer membrane protein 2 (Mmm2), is a mitochondrial outer membrane protein required for yeast mitochondrial shape and maintenance of mtDNA nucleoids. It is a component of the ERMES/Mdm complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. Mdm34 is essential for the interaction of the ER-resident membrane protein Mmm1 and the outer mitochondrial membrane-resident beta-barrel protein Mdm10. This model corresponds to the SMP domain of Mdm34, which may be implicated in lipid transport.
Statistics
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PSSM-Id: 439229
Aligned: 30 rows
Threshold Bit Score: 151.605
Created: 14-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative lipid
Feature 1:putative lipid binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                       #  ##   #   #                                                    
P53083         1 MSFRFnEAVFgd-nsFNERIREKLSTALNSpsk----------------------------------------------- 32  Saccharomyces c...
XP_001330829   1 MSLQFdWEALkp--fVQEKIREAISKVPIDa------------------------------------------------- 29  Trichomonas vag...
XP_020068082   1 MSFLFdWMSL-----HSLDLKSKVNSMLEHm------------------------------------------------- 26  Cyberlindnera j...
CDR45470       1 MSFLFsWIDL-----QSVDIRRSVNEVLSSl------------------------------------------------- 26  Cyberlindnera f...
XP_020050793   1 MSFNFdWNSLsnnflLINDFKSTLNNLLNDsfnnisf------------------------------------------- 37  Ascoidea rubesc...
XP_019041651   1 MSFLFnWLDL-----SVLDLKSSINSILSAt------------------------------------------------- 26  Wickerhamomyces...
XP_024663478   1 MSFKFnWNFFnv-eeLKEHSKVAITKSIAEsk------------------------------------------------ 31  Wickerhamiella ...
ODQ64069       1 MSFNFdWSAFadqdnYLIFNRLKTVISDAFnrrrsngngysngsshgnkgynnhtnnynnksketsdirrgrnslssswq 80  Nadsonia fulves...
CDO57517       1 MSFKFdWSPFlinhtNIESISSALSKALNRgp------------------------------------------------ 32  Geotrichum cand...
VVT57218       1 MSFTFsWNPSlvdnsNFAQIKAAIDTALAKgp------------------------------------------------ 32  Saprochaete ingens
Feature 1                                     #    #                     #      # # #            
P53083        33 -------------kkLDILKSGIKVQKVDFPt-IPQLEILDLDIItqpKSLAKGICKISC-KDAMLRIQTVIESNLLlin 97  Saccharomyces c...
XP_001330829  30 ---------------NPMLRSKVSLVSMDLGtsPPFVALTRISSLt--LKQQKISAIFRYrGNAVIEIKCDLNVNALgar 92  Trichomonas vag...
XP_020068082  27 --------------sIPHFPDKVSITELLWGdsKPVFELLDIVELt--EERFKGLFKFEYsGELKVVLRSNIEINAInli 90  Cyberlindnera j...
CDR45470      27 --------------sPTQLPQTVSMKQLSLGtsPPQFEVLDIIDLq--EGRFKGLFKFQYqGEIDIVLNSDIEINALkli 90  Cyberlindnera f...
XP_020050793  38 ---------qnidliSIFKDKKFQIENISFGsiNPCLNLNSIDFQinqNHLLTLDFNLIYnGDANLSLLSSVESNPLnsi 108 Ascoidea rubesc...
XP_019041651  27 --------------tIPQLPHKVSISSLSFGekPPKFEVLDIIDLk--EDKFKGLFKFNYdGELNVAFNTDYEANAIkli 90  Wickerhamomyces...
XP_024663478  32 --------------rPAIMADPLEVTDIDFGtsPPKLAFDSIKQVe--EGRAHIVFRIKYdGDATITLKTRLHANPLrel 95  Wickerhamiella ...
ODQ64069      81 nsrslysnsnssgelGDGSLDFVEITQLTLGtrPPDLGILEIDDLg--NGRFRGVLRLEYeGDAAMEFQTKVEANPLasm 158 Nadsonia fulves...
CDO57517      33 --------------kSPAIVGETKLKHLHLGhvPPALHLIEISDIs--DDSFRGRFRVEYnGDASISLQTFVEANPLrlf 96  Geotrichum cand...
VVT57218      33 --------------sPEGVAGPVVLQRLYLGdtPPSIHIQAVEDVa--SDRVKAVFAMQYaGNASIALRTCVQANLLrga 96  Saprochaete ingens
Feature 1                                                                                      # 
P53083        98 eqdtpsf--------------------------------------------------tmpqlinngSFTIPITMTFSSIE 127 Saccharomyces c...
XP_001330829  93 sdhsqsm-------------------------------------------------rmmgmiytsaPMIIPCRFLLSNFD 123 Trichomonas vag...
XP_020068082  91 dyddft---------------------------------------------------kphyvlancSTVLPVDFTIDKLR 119 Cyberlindnera j...
CDR45470      91 efdsfs---------------------------------------------------kphfvladkSAVLPVDINLQNVR 119 Cyberlindnera f...
XP_020050793 109 tfntlckyenhhylf----------------------------------nnqlndfilpnfplasqSSMIPFLLSLSNLS 154 Ascoidea rubesc...
XP_019041651  91 dfdpft---------------------------------------------------kpnfvltdkSTVLPVEFKIKNIK 119 Wickerhamomyces...
XP_024663478  96 fisnqwpl-----------------------------------------------fvqptlvgatnPLEIPFELKLKSIH 128 Wickerhamiella ...
ODQ64069     159 qmsaqaqgcpy-----------------------------------------ssfctpqfltetcsSLVVPIMFRVKNIK 197 Nadsonia fulves...
CDO57517      97 tkglssfi-----------------------------------------------sptgcsqgstkSLILPLEFTISDVQ 129 Geotrichum cand...
VVT57218      97 mlgedeqqdqqlrskfncsnnndadsnnnssssnsgsvgvgvddyylshlqpslalalphvlgaltPLALPLEFTIHDLR 176 Saprochaete ingens
Feature 1        #   # #       # # #          #                                          #  ##   
P53083       128 LEAITNIFVk-nPGIGISFN--DVDLDFKFDCSVKi------------------------LQSTIERRLKESMHVVFkDV 180 Saccharomyces c...
XP_001330829 124 ICVKVNVTHg--ETTFIEFEe-PPVVNFTMDSNIGkl---------------------gfIFNLSLRRIQKIIRMEYaKL 179 Trichomonas vag...
XP_020068082 120 LDLLFTVVTk-gDNVTVVFNd-EPMVDLEIHTTIDell-------------------dddLFEMLKTDALNIVTEYLkQD 178 Cyberlindnera j...
CDR45470     120 IDALLTVVYn-gKNITVVFNd-SPIIDLDIETTMDell-------------------dedLFETMKTDLLTMATEFLkQD 178 Cyberlindnera f...
XP_020050793 155 IYLQFKIVLtnkNGVIILFDdqLTNIDLKISSSLDefykilydlyntksylylnqineneITLFIKQELINGFKMSIkND 234 Ascoidea rubesc...
XP_019041651 120 IDAILTVVYn--GRVTVVFNd-DPFIDLDIETSLDefl-------------------dddLFEMIKQDTLNLVTEMLkQD 177 Wickerhamomyces...
XP_024663478 129 LDGYMDVVYt-kKGLTVLFSd-NMVTHVETESSLDgv---------------------pgVNKMITTMLTKVLAEAFeED 185 Wickerhamiella ...
ODQ64069     198 ISSLVMFVFspgRGVTLVFRh-DPSITMDIESTLDgyadptmr----------srpifnkIINRLRLRVESTMLDLFrNE 266 Nadsonia fulves...
CDO57517     130 LCGEISVVMsktKGATVVFQg-SPLRSVEIRSSLDfl---------------------pgASDMLKQEINEELVLMFsDY 187 Geotrichum cand...
VVT57218     177 LSGTVSLVVtknKGAVMVFDs-DPLQSLELSSSLDdf---------------------psVSAQLKREVEIEIREVLrDT 234 Saprochaete ingens
Feature 1         # ####  
P53083       181 LPSLIFNTS 189 Saccharomyces cerevisiae S288C
XP_001330829 180 PPKIEIQIP 188 Trichomonas vaginalis G3
XP_020068082 179 LPGMIARSH 187 Cyberlindnera jadinii NRRL Y-1542
CDR45470     179 LPGLISQVK 187 Cyberlindnera fabianii
XP_020050793 235 LPRLINYTS 243 Ascoidea rubescens DSM 1968
XP_019041651 178 LPEMLHSLT 186 Wickerhamomyces anomalus NRRL Y-366-8
XP_024663478 186 VPEMVWKVS 194 Wickerhamiella sorbophila
ODQ64069     267 IPELVHEAS 275 Nadsonia fulvescens var. elongata DSM 6958
CDO57517     188 IPDMLYKLS 196 Geotrichum candidum
VVT57218     235 IPQIVYQIT 243 Saprochaete ingens

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