Conserved Protein Domain Family
alphaCoV_Nsp14

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cd21660: alphaCoV_Nsp14 
nonstructural protein 14 of alphacoronavirus
Nonstructural protein 14 (Nsp14) of coronavirus (CoV) plays an important role in viral replication and transcription. It consists of 2 domains with different enzymatic activities: an N-terminal exoribonuclease (ExoN) domain and a C-terminal cap (guanine-N7) methyltransferase (N7-MTase) domain. ExoN is important for proofreading and therefore, the prevention of lethal mutations. The association of Nsp14 with Nsp10 stimulates its ExoN activity; the complex hydrolyzes double-stranded RNA in a 3' to 5' direction as well as a single mismatched nucleotide at the 3'-end mimicking an erroneous replication product. The Nsp10/Nsp14 complex may function in a replicative mismatch repair mechanism. N7-MTase functions in mRNA capping. Nsp14 can methylate GTP, dGTP as well as cap analogs GpppG, GpppA and m7GpppG. The accumulation of m7GTP or Nsp14 has been found to interfere with protein translation of cellular mRNAs.
Statistics
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PSSM-Id: 394959
Aligned: 56 rows
Threshold Bit Score: 987.993
Created: 24-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Feature 1:N7-MTase active site [active site]
Evidence:
  • Comment:based on the structure of SARS coronavirus Nsp14 with bound S-adenosyl-L-homocysteine and guanosine-P3-adenosine-5',5'-triphosphate
  • Comment:the (guanine-N7) methyltransferase (N7-MTase) domain functions in mRNA capping

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
NP_839967       5 CGLFKDCSRgDDLLPPSHANTFMSLADNFKTDqYLAVQIGVngpikYEHVISFMGFRFDINIPnhHTLFCTRDFAMRNVR 84   Porcine epide...
BBA21167     1457 CGLFKDCSKvEHYIPPAYATTYISLSDSFKTSdGLAVNVGTkp-vtYASVISYMGFRFDVNIPgyHTLFCTRDFAMRNVR 1535 Ferret corona...
AVY53334     5522 CGLFKDCAKvEHYIPPAYATTYISLSDSFKTSnGFAVDVGNkp-vtYASVISYMGFRFDANIPgyHTLFCTRDFAIRNVR 5600 Alphacoronavi...
ATP66783     5235 VGLFKDCYRnVFTLNPAQSHTYEALSDKYKSG-NLAVWFGEsn-ltYEHVISMLGFKLDQTVPgyHSLFCTRTFAIKHVR 5312 Shrew coronav...
ASF90469     5178 TGLFKSCVRvPYEVGPAYATTFMHLTDRFKVSsDLAVALPSvn-ptFEDVVNLMGFKLDVVPDgyNPLFCTRSYAIQHVR 5256 Wencheng Sm s...
ATP66788     5566 SGLFKNCIRkGHDLPPNHARSFLDLDSRFKVTdELAVHIGSse-ptYEHVLSWMGFRFDACPKgyHTMFCTRDFAIRNVR 5644 Rodent corona...
YP_009256195 5471 CGLFKDCSKaERYIPPAYATTYISLSDSFKTSdGLAVNVGTkp-vtYASVISYMGFRFDVNIPgyHTMFCTRDFAMRNVR 5549 Ferret corona...
YP_009380520 1507 SGLFKNCIRnVHELPPNHARSFLDLNSKFKVNeELAVHIGVse-ptYEHVLSWMGFRFDACPEgyHTMFCTRDFAIRNVR 1585 Coronavirus A...
ASF90459     5164 TGLFKSCVRvPYEVGPAYATTFMHLTDRFKVSnDLAVALPSvn-ptFEDVVNLMGFKLDVVPDgyNPLFCTKSYAIQHVR 5242 Wencheng Sm s...
YP_009019180 5531 CGLFKDCAKvEHYIPPAYATTYISLSDSFKTNnGFAVDVGNkp-vtYASVISYMGFRFDANIPgyHTLFCTRDFAIRNVR 5609 Mink coronavi...
Feature 1                                                                                         
NP_839967      85 GWLGFDVEGAHVVGSNVGTNVPLQLGFSNgVDFVVRPEGCVVtesGDYIKPVRARAPPGEQFAHLLPLLKRGQPWDVVRK 164  Porcine epide...
BBA21167     1536 AWLGFDVEGAHVCGDNVGTNVPLQLGFSNgVDFIVQPEGCVVtenGNDIRPVKSRAPPGEQFAHLIPLMRKGQAWSIVRR 1615 Ferret corona...
AVY53334     5601 AWLGFDVESAHVCGDNIGTNVPLQLGFSNgVDFVVQPEGCVVtdkGSSICPVKSRAPPGEQFAHLIPLMRRGQAWSIVRR 5680 Alphacoronavi...
ATP66783     5313 GWIGFDVEAAHVCGENIGTNVPLQLGFSTgIDFIAQPEGCVVtgsGNQIIPVKARAPPGEQFTHLIPLLRKGKPWSTVRR 5392 Shrew coronav...
ASF90469     5257 GWIGFDVESVHCCTDNVGTNLPLQLGFSNgFNFVVKPEACVMnnnKVYWKNVKTKVPPGEQFLHLIPLMRKTQDWNVVRK 5336 Wencheng Sm s...
ATP66788     5645 GWLGFDVEGAHVCGDNCGTNVPLQLGFSNgVDFVVQPEASYAtqhGILVKNVKARAPPGEQFTHLVPLLRKGQPWAVVRK 5724 Rodent corona...
YP_009256195 5550 AWLGFDVEGAHVCGDNIGTNVPLQLGFSNgVDFVVQPEGCVVtenGNGIVPVKSRAPPGEQFAHLIPLMRRGQAWSIVRR 5629 Ferret corona...
YP_009380520 1586 GWLGFDVEGAHVCGENCGTNVPLQLGFSNgVDFVVQPEAGYAthlGILIKGVKARAPPGEQFTHLVPLLRKGQPWVVVRK 1665 Coronavirus A...
ASF90459     5243 GWIGLDVESVHCCTDNVGTNLPLQIGFSNgLNFVVKPEACVMnnnKVYWKNVKTKVPPGEQFTHLIPLMRKTQDWSVVRK 5322 Wencheng Sm s...
YP_009019180 5610 AWLGFDVESAHVCGDNIGTNVPLQLGFSNgVDFVVQPEGCVVtdkGSSICPVKSRAPPGEQFAHLIPLMRRGQAWSIVRR 5689 Mink coronavi...
Feature 1                                                                                         
NP_839967     165 RIVQMCSDYLanLSDILIFVLWAGGLELTTMRYFVKIGPSKSCDCGKVATCYNSalHTYCCFKHAlGCDYLYNPYCIDIQ 244  Porcine epide...
BBA21167     1616 RIVQMVCDYFdgLSDIVIFVLWAGGLELTTMRYFVKIGEQRKCECGIVAACYNStqCTYHCMRHAlGCDYLYNPFCIDIQ 1695 Ferret corona...
AVY53334     5681 RIVQMVCDYFdgLSDIVIFVLWAGGLELTTMRYFVKIGVPCKCDCGVVATCYNSaqGTYHCMKHAlGCDYLYNPYCIDIQ 5760 Alphacoronavi...
ATP66783     5393 QIVQMCSDQLkgKSDIVIFVTWACGLELSTLRYFAKIGPHKTCFCGKTASCVCLaeNKYCCFDHSfGCDYLYNPFVVDIQ 5472 Shrew coronav...
ASF90469     5337 RIVSMLCDQFkgVTNEIIILTWAHGMELMTMRYFVKIGVVKRCYCGRRPKFYDSenVEFKCLFHGyGCDYLYNPKLVDVQ 5416 Wencheng Sm s...
ATP66788     5725 RVIQMVCDHLkdLSDVVVFVLWAGGLELTTMRYFVKIGPSRNCHCGRVAQCYSSnaAAFSCLRHAvGCDYLYNPYAFDIQ 5804 Rodent corona...
YP_009256195 5630 RIVQMVCDYFegLSDIVIFVLWAGGLELTTMRYFVKIGEQRKCDCGIIAACYNSaqCTYRCMKHAlGCDYLYNPFCIDIQ 5709 Ferret corona...
YP_009380520 1666 RIVQMVCDHLkdLSDVVVFVLWAGGLELTTMRYFVKIGPPRNCHCGRIAQCYSSnaSAFSCLRHAvGCDYLYNPYAFDIQ 1745 Coronavirus A...
ASF90459     5323 RIVSMLCDQFkgVTSEIIILTWAHGMELMTMRYFVKIGVVKRCYCGMEAKFYDSenVEFKCLFHGyGCDYLYNPKLVDVQ 5402 Wencheng Sm s...
YP_009019180 5690 RIVQMVCDYFdgLSDVVIFVLWAGGLELTTMRYFVKIGVPCKCDCGVVATCYNSaqGTYHCMKHAlGCDYLYNPYCIDIQ 5769 Mink coronavi...
Feature 1                                                       #             #  ##  #            
NP_839967     245 QWGYKGSLSLNHHEHCNVHRNEHVASGDAIMTRCLAIHDCFvknVDWSITYPFIgnEAVINKSGRIVQSHTMRSVLKlyN 324  Porcine epide...
BBA21167     1696 QWGYTGSLSMNHHEICNVHKNEHVASGDAIMTRCLAIHDCFvkrVDWSITYPFIdnEEAINKAGRVVQAHVVRAAINvlN 1775 Ferret corona...
AVY53334     5761 QWGYTGSLSMNHHEVCNVHRNEHVASGDAIMTRCLAVHDCFvkrVDWSITYPFIdnEAAINKAGRVVQSHVVRAAIKvlN 5840 Alphacoronavi...
ATP66783     5473 TWGYSGKLSVAHDEHCNLHRNAHIASGDAIMTHCLAAHDCFvkqVNWDITYPFIscEKRLNASLRVIQRNLMTAIIKatG 5552 Shrew coronav...
ASF90469     5417 QWGYVGKLADNHDMHCALHRNAHVASGDAIMTRCLAVYDSFvkkVEWNIVYPYIgeEKAINAAGRFVERHIMSVFLKlyK 5496 Wencheng Sm s...
ATP66788     5805 QWGYTGSLSSNHHRYCNVHFNEHVASGDAIMTRCLAIYDCFvkdVHWDITYPYItnEQDINAAGRYVERHLMNTFVKlyN 5884 Rodent corona...
YP_009256195 5710 QWGYTGSLSMNHHEICNVHKNEHVASGDAIMTRCLAIHDCFvkrVDWSITYPFIdnEESINKAGRVVQSHVVRAAISvlN 5789 Ferret corona...
YP_009380520 1746 QWGYVGSLSANHHRYCNVHFNEHVASGDAIMTRCLAIYDCFvksVCWNITYPYItnEKDINAAGRYVERHLMNSFLKlyN 1825 Coronavirus A...
ASF90459     5403 QWGYVGKLADNHDMYCALHRNAHVASGDAIMTRCLAVYECFvkkVEWNIVYPYIgeEKAINAAGRFVERHVMSVFLKlyK 5482 Wencheng Sm s...
YP_009019180 5770 QWGYTGSLSMNHHEVCNVHRNEHVASGDATMTRCLAVHDCFvkrVDWSITYPFIdnEATINKAGRVVQSHVVRAAIKvlN 5849 Mink coronavi...
Feature 1                #### #            ###        ###                #####           #        
NP_839967     325 PKAIYDIGNPKGIRCAVtDAKWFCFDKNPtNSNVKTLEYD--YITHGQFDGLCLFWNCNVDMYPEFSVVCRFDTRCRSpl 402  Porcine epide...
BBA21167     1776 PSSIHDVGNPKGIRCVTtSLPWFCYDKDPiNSNVRCLEYD--FITHGQMPGLMLFWNCNVDMYPEQSIVCRFDTRTRSkl 1853 Ferret corona...
AVY53334     5841 PSAIHDVGNPKGIRCVTtPLPWFCYDKDPiNSNVRCLDYD--FITHGQMPGLMLFWNCNVGMYPECSIVCRFDTRTRSkl 5918 Alphacoronavi...
ATP66783     5553 VKTVYDIGNPKGIKCSEvDVVWKFFDKQPvNDNVVVFSYDyiEHKSMFKDGLTMFWNCNVNVYPENAVVCRFDTRTRSpl 5632 Shrew coronav...
ASF90469     5497 PEAIHDIGNPKGIRCVVyDKSWYCYDKDPvNSNVRELCYD--YETHGQFKGLMLFWNCNVSCYPEFSLVCRFDTRVCNky 5574 Wencheng Sm s...
ATP66788     5885 PKAIYDVGNPKGIRICDfKGSWYCYDKEPtNNNVVKLEYD--YTVHGQFDGLCLFWNCNVDMYPGFSLVCRFDTKHRSpl 5962 Rodent corona...
YP_009256195 5790 PSSIHDVGNPKGIRCVTtSLPWFCYDKDPiNSNVRCLEYD--FITHGQMPGLMLFWNCNVDMYPEQSIVCRFDTRTRSkl 5867 Ferret corona...
YP_009380520 1826 PKAIYDIGNPKGIRICDfKGSWFCYDKEPtNNNVVKLEYD--YTVHGQFDGLCLFWNCNVDMYPGFSLVCRFDTKHRSpl 1903 Coronavirus A...
ASF90459     5483 PEAVHDIGNPKGIRCVVyDKSWYCYDKDPvNSNVKELCYD--YETHGQFKGLMLFWNCNVNCYPEFSLVCRFDTRVCNky 5560 Wencheng Sm s...
YP_009019180 5850 PSAIHDVGNPKGIRCVTtPLPWFCYDKDPiNSNVRCLDYD--FITHGQMPGLMLFWNCNVDMYPECSVVCRFDTRTRSkl 5927 Mink coronavi...
Feature 1                   # ##  # #                                                             
NP_839967     403 NLEGCNGGSLYVNNHAFHTPAFDKRAFAKLKPMPFFFYDDTECDklqd----sinYVPLRASNCITKCNVGGAVCSKHCA 478  Porcine epide...
BBA21167     1854 SLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYFDDSTCDiidg----qpnYVPLKSNVCITKCNIGGAVCKKHAA 1929 Ferret corona...
AVY53334     5919 SLEGCNGGALYVNNHAFHTEAYDRRAFAKLQPLPFFFFDDSTCElvdg----qpnYVPLKSNVCITRCNIGGAVCKKHAA 5994 Alphacoronavi...
ATP66783     5633 SLLGPNGGCVYVNNHAFYTEPFDRRSFCHLQPMQFFFFDDTECEkvdg----sydMVPLRSNTCFTKCNVGGAGCRKHVQ 5708 Shrew coronav...
ASF90469     5575 NLEGVNGGSLYVNKHAFHTDFYDKRAFVNLKQIPFFFFDDSDCEvihd----iinYVPLSDKNCITRCNIGNAICNKHAK 5650 Wencheng Sm s...
ATP66788     5963 SLEGVNGGCLYVNKHAFHTPAFDRRALAKLQALPFFFFDDSDCDvvsdaegsevdYVPLRSNVCVTKCNVGGAVCKKHAS 6042 Rodent corona...
YP_009256195 5868 SLEGCNGGALYVNNHAFHTPAYDRRAFAKLKPMPFFYFDDSTCDvidg----qpnYVPLKSNVCITKCNIGGAVCRKHAA 5943 Ferret corona...
YP_009380520 1904 SLEGVNGGCLYVNKHAFHTPAFDRRAFGKLQPLPFFFFDDGECDivsdaegpevdYVPLRSNVCITKCNVGGAVCKKHAS 1983 Coronavirus A...
ASF90459     5561 NLEGVNGGSLYVNKHAFHTDFYDRRAFANLKQIPFFFFDDSECEvicd----vvnYVPLSDKNCITKCNIGNAICSKHAK 5636 Wencheng Sm s...
YP_009019180 5928 SLEGCNGGALYVNNHAFHTEAYDRRAFAKLKPLPFFFFDDSTCElvdg----qpnYVPLKSNVCITRCNIGGAVCKKHAA 6003 Mink coronavi...
Feature 1                         #                   
NP_839967     479 MYHSYVNAYNTFTSAGFTIWVPTSFDTYNLWQTFSN 514  Porcine epidemic diarrhea virus
BBA21167     1930 LYRKYVEEYNMFVQAGFNIWCPPNFDTYTLWHSFVN 1965 Ferret coronavirus
AVY53334     5995 LYRKYVEDYNTFVQAGFTIWGPTNFDIYTLWQSFVS 6030 Alphacoronavirus Mink/China/1/2016
ATP66783     5709 MYKEYLECFNLAVEQGFTFWVPKTFDLYHLWALLRK 5744 Shrew coronavirus
ASF90469     5651 LYQEYLKKYNLFVSNGFNLWGPKSFDIYNLWSLLKG 5686 Wencheng Sm shrew coronavirus
ATP66788     6043 LYKTYVQKYNEFTQNGFTLWGPQNFDLFNLWQLVSK 6078 Rodent coronavirus
YP_009256195 5944 LYRKYVEDYNMFVQAGFNIWCPTNFDTYTLWHSFVN 5979 Ferret coronavirus
YP_009380520 1984 LYKTYVQKYNDFTQNGFTLWGPRNFDLFNLWQLVSR 2019 Coronavirus AcCoV-JC34
ASF90459     5637 LYQEYLEKYNLFVSNGFNLWGPKSFDVYNLWSLLRG 5672 Wencheng Sm shrew coronavirus
YP_009019180 6004 LYRKYVEDYNTFVQAGFTIWGPSNFDTYTLWQGFVN 6039 Mink coronavirus strain WD1127

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