Conserved Protein Domain Family
SPOC_DIDO1-like

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cd21547: SPOC_DIDO1-like 
SPOC (Spen paralog and ortholog C-terminal) domain found in some death-inducer obliterator variants
The Dido/DIDO1 gene has been implicated in several cellular processes such as apoptosis and chromosomal segregation, particularly in the hematopoietic system. It encodes alternative splicing variants, including Dido1, 2, and 3, with Dido3 being the longest isoform and Dido1 being the shortest. Dido3 is ubiquitously expressed in all human tissues, is dispensable for embryonic stem (ES) cell self-renewal and pluripotency, but is involved in the maintenance of stem cell genomic stability and tumorigenesis. Dido3 contains a PHD finger, a transcription elongation factor S-II subunit M (TFSIIM) domain, a SPOC module, and a long C-terminal region (CT) of unknown homology. Dido2 and Dido1 are truncated at the C-terminus relative to Dido3, with Dido2 containing a partial SPOC domain whereas Dido1 is missing it completely. Dido1, also called DIO-1, or death-associated transcription factor 1 (DATF-1), is important for maintaining ES cells and directly regulates the expression of pluripotency factors. The conserved plant homeodomain (PHD) finger is responsible for the binding of histone H3 with a higher affinity for trimethylated lysine 4 (H3K4me3). The Dido/DIDO1 gene is a bone morphogenetic protein (BMP) target gene, which promotes BMP-induced melanoma progression. It also triggers apoptosis after nuclear translocation and caspase upregulation. This model corresponds to the SPOC domain which is involved in developmental signaling and has also been proposed to be a phosphorylation binding module.
Statistics
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PSSM-Id: 439210
Aligned: 7 rows
Threshold Bit Score: 315.715
Created: 3-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9BTC0       1056 IWKGFINMQsVAKFVTKAYPVSGCFdyLSEDLPDTIHIGGRIAPktVWDYVGKLKSSvskELCLIRFHPATEEEEVaYIS 1135 human
Q63ZQ9       1016 IWKGFINMQsVAKFVTKAYPVSGSVeyLNEDLPDTIHIGGRISPktVWDYVGKLKSSqtkELSLIRFHPATEEEEVaYIS 1095 African clawe...
GCF59088     1048 IWKGFINMQsVAKFVTKAYPVSGSFdyLSEDLPDTIHIGGRISPktVWDYIGKLKSSvskELCLIRFHPATEEEEVaYIS 1127 Paroedura picta
XP_005993536 1224 IWKGFINMHsVAKFVTKAYPVSGSIehLQEDLPDTIHVGGRISPqtVWDYVSKLKSSlskELSLIRFHPATEEEEVaYIS 1303 coelacanth
XP_007909432 1122 IWKGFINMHgVAKFVTKAYPVSGSIdyLVEDLPDTIHIGGRISPhtVWDYVSKLKSSlskEVCLIRFHPATEEEEVtYVS 1201 elephant shark
TNM88423     1209 IWKGLIYMQsVAKFVTKAYLVSGSFdhLKEDLPDTIHIGGRISPstVWDYVGKLKTSlskELCLIRFHPATEEEEVaYVS 1288 Takifugu bima...
AAS49899     1056 IWKGFINMQsVAKFVTKAYPVSGCFdyLSEDLPDTIHIGGRIAPktVWDYVGKLKSSvskELCLIRFHPATEEEEVaYIS 1135 Homo sapiens
Q9BTC0       1136 LYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLESPRPNIILGLVICQK 1198 human
Q63ZQ9       1096 LYSYFSSRCRFGVVANNNRHVKDLYLIPLSAKDPIPSKLLPFDGPGLEATRPNLILGLVICQR 1158 African clawed frog
GCF59088     1128 LYSYFSSRGRFGVVANNNRHVKDLYLIPLSAKDPIPSKLLPFEGPGLESTRPNLILGLVICQK 1190 Paroedura picta
XP_005993536 1304 LYSYFNSRGRFGVVANNNRHVKDLYLIPLGAKDPIPSRLLPFEGPGLEQNRPNLILGLVICQK 1366 coelacanth
XP_007909432 1202 LYSYFNSRGRFGVVANNARHIKDLYLIPLAAKDPIPSKLLPFEGPGLEKSRPNVILGLVIRQR 1264 elephant shark
TNM88423     1289 LFSYFSSRQRFGVVANNNRRIKDLYLIPLGSKDPLPSNLLPFDGPGLEPARPNILLGLLICQK 1351 Takifugu bimaculatus
AAS49899     1136 LYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLESPRPNIILGLVICQK 1198 Homo sapiens
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