Conserved Protein Domain Family
SPOC_Bye1p-like

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cd21542: SPOC_Bye1p-like 
SPOC (Spen paralog and ortholog C-terminal) domain found in Saccharomyces cerevisiae bypass of ESS1 protein 1 (Bye1p) and similar proteins
Yeast Bye1p is a nuclear transcription factor with a domain resembling the central domain in the transcription elongation factor TFIIS. It plays an inhibitory role during transcription elongation. It functions as a multicopy suppressor of Ess1, a peptidyl-prolyl cis-trans isomerase involved in proline isomerization of the C-terminal domain (CTD) of RNA polymerase II (Pol II). Bye1p contains an N-terminal plant homeodomain (PHD) finger, a central Pol II-binding TFIIS-like domain (TLD) domain, and a C-terminal SPOC domain. This model corresponds to the SPOC domain which is involved in developmental signaling and has also been proposed to be a phosphorylation binding module.
Statistics
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PSSM-Id: 439205
Aligned: 19 rows
Threshold Bit Score: 119.703
Created: 3-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P36106       435 SLNCAFLYPGlgLEFTgylnYIGASQKLRRDifke--------------aigDGKLYVEGRLPTttAAPYLKEISCSr-- 498 Saccharomyces c...
XP_015784175 445 MLAGYFSTNLgsFEFKy--hVISSNRKNVLQy-------------------lPKSLETKGRANTneTEVFLTGEMLRpek 503 two-spotted spi...
ROV98597     167 RWTGRVIDTFtnTEFRavisRVSAVKPASTSeqpw-------------ttfiSKDVRTMSRVGIedVTKRFRQSCSDpfa 233 Valsa sordida
KTB23879     447 NVKFKLDYNEvdLNVVgtfkFLGSTLLEENQehkiy-----------qavvgDGKLIYEGRLHTkiATEYISEIKTTr-- 513 [Candida] glabrata
XP_003672679 491 EKGVTINYPElgYIFSgnikYHGISHSIKSQnvkqlnif-----gneydpkgNYKLFAEGRLSSskAFDYLDQIKSSssr 565 Naumovozyma dai...
SCW04453     388 ISNCTIQYDEinAKFVasakFLGSSRPLNQRvctd--------------amnSHLFTVEGRLSSdeGDKYLNQMLNTr-- 451 Lachancea ferme...
GAV52060     363 PVRINVKYPElaLELNgtidYIGSSSELAKNpyre--------------algDGKLLVEGRLSKekVLKYLSEMQSTr-- 426 Zygosaccharomyc...
SCV01395     394 LWSCSVEYKDiqTKFSgeikFLASSQQISNTvrrd--------------aigDGAFVVEGRLKDedAEGYIEQMCKTr-- 457 Lachancea meyer...
SCV00214     380 LFEITVDYSDiaCHFKselyYIGSSEHVEQKvvse--------------vvgDAKLRVEGRLSAaeGDKYLIQMSNSr-- 443 Lachancea miran...
A5DDB7       415 VWKGEIVFPDf-ASFSav-aELKSCTNYVEPsdsqtarnfsrfikvgkellsRKKHEVEGRLDKnrADDYLNKVVSSr-- 490 Meyerozyma guil...
P36106       499 AILVYQLFPsndse---skttFADVVDSLENKGRIAGIKPktr-yeKDFYIVPSKggeipeilkdilgsh-nderserfs 573 Saccharomyces c...
XP_015784175 504 KVIAFQLLPndsse---skrnFDNYVAHLHSRTRYGLLNYks--dtYRAYVFPCVkghailkafe----------icnlk 568 two-spotted spi...
ROV98597     234 DTIVLRLEPayea----dkaaFDKVFDFFESIALYSDLYHpglgkvKDTFLIPAPardgyptaisil------npsglpk 303 Valsa sordida
KTB23879     514 AVLAYQLLPsash-----rekYEQLVEFMDDLDRVLGMKPrkp-yvKNMYILSSLlgklpdilqilttdesiakkridls 587 [Candida] glabrata
XP_003672679 566 VILIYQLFQtndhangddngaCSRLFDHLIEEKRVVGIRNkqk-yeKIIYLIPHDrrndqellqiqnlidenlteipisn 644 Naumovozyma dai...
SCW04453     452 ILVVYELIPnehps---dqdkFSEFFEFLSKRHRYGALKTnre-yvRHIYVIPWNngeehtlfnli---------psien 518 Lachancea ferme...
GAV52060     427 AFLLYRIRPdetc-----dteFKQIYDFLWENEKISGIRNkrs-yqKNIYLIPSFgydhhvikdia--------taagqs 492 Zygosaccharomyc...
SCV01395     458 TFLAYLLKPhansh---dsqqFEALYEFLASRQRYGALKAkrq-yvRHVYVIPYSqdqhlgvfkhm--------qlpede 525 Lachancea meyer...
SCV00214     444 IFLAFRLKAkgddq---nfaeFDRLFEFLTSRQRYGALEPkks-yvRHVYMIPCEnheypdildc----------isste 509 Lachancea miran...
A5DDB7       491 DFYLIEIKPtan------hpdYDKLYGYLLDREKVGVLSGkps-faKDSYLITLEksrplppyl-------------stl 550 Meyerozyma guil...
P36106       574 rmksdERTLFAFVVVK 589 Saccharomyces cerevisiae S288C
XP_015784175 569 psfarTYELYGIIIKK 584 two-spotted spider mite
ROV98597     304 rptenMLLLVVLYQVN 319 Valsa sordida
KTB23879     588 rindnDKTLYLVVVVK 603 [Candida] glabrata
XP_003672679 645 dtilnDRTFFLVVVVK 660 Naumovozyma dairenensis CBS 421
SCW04453     519 sikmeSRALLVVAVVR 534 Lachancea fermentati
GAV52060     493 detaaDATLFILTVIK 508 Zygosaccharomyces rouxii
SCV01395     526 kdliaGNCLVVVAIVR 541 Lachancea meyersii CBS 8951
SCV00214     510 gfsknAKNVFVIAVVR 525 Lachancea mirantina
A5DDB7       551 kgfeqSTGLFALYVVR 566 Meyerozyma guilliermondii ATCC 6260
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