Conserved Protein Domain Family
ABC-2_lan_permease

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cd21503: ABC-2_lan_permease 
lantibiotic immunity ABC transporter permease (also called ABC-2 transporter permease) subunit
This family contains lantibiotic ABC transporter permease subunits which are highly hydrophobic, integral membrane proteins, and part of the bacitracin ABC transport system that confers resistance to the Gram-positive bacteria in which this system operates, particularly to type-A lantibiotics. Lantibiotics are small peptides, produced by Gram-positive bacteria, which are ribosomally-synthesized as pre-peptides and act by disrupting membrane integrity. Genes encoding the lantibiotic ABC transporter subunits are highly organized in operons containing all the genes required for maturation, transport, immunity, and synthesis. For example, in Lactococcus lactis, the lantibiotic nisin is active against other Gram-positive bacteria via various modes of actions; however, its self-protection against the pore-forming nisin is mediated by the ABC transporter composed of NisF, NisE and NisG subunits. This family includes the Lactococcus lactis NisG permease subunit that transports nisin to the surface and expels it from the membrane. This family also includes the lantibiotic ABC transporter permease subunits EpiE, MutE, MutG, and SlvE. Self-protection of the epidermin-producing strain Staphylococcus epidermidis Tu3298 against the pore-forming lantibiotic epidermin is mediated by an ABC transporter composed of the EpiF, EpiE, and EpiG proteins. In the mutacin I-producing strain Streptococcus mutans CH43, self-immunity against mutacin I is mediated by proteins MutF, MutE, and MutG, while in salivaricin D-producing strain Streptococcus salivarius 5M6c, mediation is via ABC transporter proteins SlvF, SlvE, and SlvG.
Statistics
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PSSM-Id: 409631
Aligned: 18 rows
Threshold Bit Score: 78.8829
Created: 23-Dec-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1: N-terminal hydrophilic motif [structural motif], 9 residue positions
Conserved feature residue pattern:[ST] [DE] x [LIVFYM] [RK] x [RK] x [ST]Click to see conserved feature residue pattern help
Evidence:
  • Comment:this hydrophilic region may have a role in the interactions with the ATP-binding protein of the ABC-type transport complex

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #########                                                                       
ADJ56362       4 SECLKLKNSlgfyLVFLFTLLELLTVPIYlafgrs--------hvsmtdLSLMIFLFFPLLVTILSiLIFEQESl--aNR 73  Lactococcus lac...
AAC43328       7 SEAIKLKKSgtlrLVLIIPFVTLFIAFLMggiqi----------fsvfsIYWWETGFLFLLMSLLFlYDIKSEEq--aGN 74 
WP_049553421   7 SNFIKIKNTsflvVHSLSAVLFPMLLSLYwiqrghin-----entalfsYFQIVGVLLPFASSIVSvQLKNLEEe--sGK 79  Streptococcus
WP_090221689  10 IEWLKTKRTffrfFLLVFPVAFALSISWKisslgmkne---iekdvfmlRNVFYTFFFPFLISFIPsYLIGYESihgeNA 86  Fervidobacteriu...
WP_028087991   9 VERIKSKRT----MLNIIPFVLSIIVVSSifflcrtsskdeivsesihyWISISAMIAPLLVGILAgIMGEQEQe--aGN 82  Dorea
WP_117441975   9 VEHIKSKRT----MLNIIPFALSLIVTICilficrtsnkdeivsnslyyWINISSIAVPLLVGILAgIMGEQEQe--aGN 82  Firmicutes
WP_002317717   9 AEHLKSKRT----ILKKIPFVLAFVIVGFilfvfrssdkneivmnsgnyWITISAMIAPILIGILAgITGEQEQe--aGN 82  Firmicutes
EEU79936       7 AEWLKTKKTffrtALYCSPILFNLLIFGYiiltnqkv----sassfyanYFSILNFLLPFTVSFILgLMNNCERe--aGN 80  Enterococcus fa...
WP_121525072   6 ATTLKLIHTnwviVMVALPILYGLLLYWYlgryndp-------eliffsYATYYNCLLPFGIALMIsLYTQYEEq--iGH 76  Oceanobacillus ...
WP_056984977   6 AEWLKIKRTgirwMVIAFPILLAFFTILYiwthkg--------ivrinlINTWFNIWLSLIMPLFIgVLVGLDI----HK 73  Pediococcus aci...
Feature 1                                                                                        
ADJ56362      74 FQEINVNKKSs-------rIWLSK--------LIVVDFLLFFPSAMIWIITGVsqav---------gqqGMMIATASWLM 129 Lactococcus lac...
AAC43328      75 FQNVKWKKLSw-------kIHLAKmlliwlrgILASIVLIILLYLVAFVFQGIvvvdf-------mkvsVALIAILLAAS 140
WP_049553421  80 FKYLLGYSQSny------kPFFVElv----flWLCYSIVLLTSFSLFGIIMITngirvn----llfvllALLFYIILAFI 145 Streptococcus
WP_090221689  87 FVNVKYSKSK---------LVFSK--------VLFSLLCLSWILFAIDLIYFFtikhlgihiqygilffSSVIPLLGSFP 149 Fervidobacteriu...
WP_028087991  83 YQVIRRSVHKg-------qNWLFKciyllfilTSFVLVSMVLLYIGIWGIYHPdncta-------llflKTAIIFLIGLI 148 Dorea
WP_117441975  83 YQVIRKSIHRg-------qNFFFKslyllsllAYFVFFSMILLYISIWSVYHPdnfta-------llflKTALIFMVGSL 148 Firmicutes
WP_002317717  83 YQIIRKSTHRg-------mNFLAKamyligilTFFVVFSMLLLYVSIWCIYKPenytl-------ipalKTTLIFIVGSL 148 Firmicutes
EEU79936      81 FKNIFGFDHHyy------fLLSLKfifs-ylvISLVFLFNSLLTIVLLKFTFNisytvfys-hfiygfsLTWISFITSFI 152 Enterococcus fa...
WP_121525072  77 FNHLLQLPHRdkwl--mnmLFMSWl------sVGISTFISSVPLWLLVDSTFNqhv-----------myYLLITTLFSLP 137 Oceanobacillus ...
WP_056984977  74 EAEIKQFSALfanqisrkkIFLTKyi----flCLCFLVSILLSTGIFWLGTLGlanaip----lrillmGVAFGVIGTLP 145 Pediococcus aci...
Feature 1                                                                                        
ADJ56362     130 AIFLNHFHLLLTfiinrgGSMIIai---iEILLIIFASNKVLLAAYWCPIALPVNFMit-------------------gr 187 Lactococcus lac...
AAC43328     141 WNLPFIYLIFKWin--tyVLLAAn----tLICLIVAPFVAQTPVWFLLPYTYHYKVTesllnikps------gdlltgki 208
WP_049553421 146 IYILNHIISYLYst---gVVLGIsm--igVIIAAFCETSLGDRVWFLIPWSWLLRISdilf----------------nqq 204 Streptococcus
WP_090221689 150 AVLLHVLITFKWrm---gLSLAIg----tVGALLSEMINAGLGYKMWYIFPWSIPSTfntysivllkn-ikindhvtnll 221 Fervidobacteriu...
WP_028087991 149 FLVPFQLWSSFYfn--igASIGFgifgtiLVAYISSFPIIEENIWRFIPWIWSLKTTeifvdn-----------nnlyvq 215 Dorea
WP_117441975 149 FLVPFQLWSSFYfn--mgASIGFgifgtiFVAYISSLPMIEERIWRLIPWTWSMKTTsiyfdn-----------ntlnvq 215 Firmicutes
WP_002317717 149 FLVPFQLWISIYlg--mgASIGIgilgtiFVSYISSFPMLEEQLWRVIPWIWTLKTTtlyfen-----------islsvq 215 Firmicutes
EEU79936     153 IYFFLSIMCGFIt----tLFIGLvs---sLLTAIIGLTALGNGIWLFFPFTWGGRLItmsdsnssl------ikffyent 219 Enterococcus fa...
WP_121525072 138 IIIISWFVALKInt---gLCLGVgif-fsLFLILFGANSLGDTIWMYIPLLYGTRYLyvi-----------------dvs 196 Oceanobacillus ...
WP_056984977 146 VVALQIWISFKWnl---gISISVsif-gfLLSTLIGTTNLGEKIWYLIPWTYAYRLSeitnvfvvnsvdenfrnqvigla 221 Pediococcus aci...
Feature 1                             
ADJ56362     188 CAYLIAAVGWIVLSTIILVAL 208 Lactococcus lactis subsp. lactis
AAC43328     209 NFSIWEVLLPFGLSIVVTIGV 229
WP_049553421 205 KIGVTQLFVMVIISLVLFFFH 225 Streptococcus
WP_090221689 222 SQFSPIQIYLGSIMNGITTSV 242 Fervidobacterium changbaicum
WP_028087991 216 GFNLPLDLMIQILSTVLLFVG 236 Dorea
WP_117441975 216 GVNLPLDLMIQLLFFVLLFVG 236 Firmicutes
WP_002317717 216 GVNLPLDLAIQFVSFVLLLIG 236 Firmicutes
EEU79936     220 HLSSILLLCPITFFFVLITVC 240 Enterococcus faecalis Fly1
WP_121525072 197 NEFSLFIFSIFFLFSGLLLAS 217 Oceanobacillus sp. YLB-02
WP_056984977 222 EQTGVIGIVASLVTSLLFLAG 242 Pediococcus acidilactici

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