5KDG,5OEC,5OED


Conserved Protein Domain Family
GtgE

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cd21501: GtgE 
Salmonella enterica effector protein GtgE
The Salmonella enterica GtgE effector protein contributes to the virulence of this pathogen by modulating trafficking of the Salmonella-containing vacuole. GtgE, which exclusively targets inactive Rab GTPases, has been identified as a cysteine protease with the typical Cys-Hip-Asp catalytic triad. It functions by cleaving the Rab-family GTPases Rab29, Rab32 and Rab38, thereby preventing the delivery of antimicrobial factors to the bacteria-containing vacuole. It has been shown to solely process the inactive GDP-bound GTPase Rab32. However, weak binding of GtgE to the peptide encompassing the Rab29 cleavage site suggests that the function of GtgE may be dependent on other factors, such as a protein partner or interactions with the Salmonella-containing vacuole (SCV) membrane.
Statistics
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PSSM-Id: 411070
Aligned: 8 rows
Threshold Bit Score: 323.964
Created: 23-Dec-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic siteRab GTPase
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 3 residue positions
Conserved feature residue pattern:C H DClick to see conserved feature residue pattern help
Evidence:
  • Comment:GtgE is identified as a cysteine protease with a catalytic triad of Cys-His-Asp

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #                                                                           
5KDG_A        18 LYNNSWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 97  Salmonella ente...
5OEC_A        24 LYNNAWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQxipESSLFTNIXEALQaevfnSTV 103 Salmonella ente...
5OED_A        43 LYNNAWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQxipESSLFTNIXEALQaevfnSTV 122 Salmonella ente...
AAT12442      41 LYNNCWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 120 Salmonella ente...
AAT12437      41 LYNNCWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 120 Salmonella ente...
WP_079956080  41 LYNNCWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 120 Salmonella ente...
TYN63150      41 LYNNCWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 120 Salmonella ente...
KNT68522       9 LYNNCWVCSLNVIKSRdgNNYSALEDITSDNQafnNILEGIDIIECENLLKEMNVQkipESSLFTNIKEALQaevfnSTV 88  Salmonella ente...
Feature 1                                      #                 #                               
5KDG_A        98 EDNFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 177 Salmonella ente...
5OEC_A       104 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVXXVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 183 Salmonella ente...
5OED_A       123 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVXXVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 202 Salmonella ente...
AAT12442     121 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 200 Salmonella ente...
AAT12437     121 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 200 Salmonella ente...
WP_079956080 121 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 200 Salmonella ente...
TYN63150     121 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 200 Salmonella ente...
KNT68522      89 EDDFESFISYELQNhgPLMLIRPSLGSECLHAECIVGYDSeVKKVLIYDSMnTSPEWQSNIDVYDKLTLAFNDKYKneDC 168 Salmonella ente...
Feature 1                      
5KDG_A       178 SICGLYYDgVYEPK 191 Salmonella enterica subsp. enterica serovar Typhimurium
5OEC_A       184 SICGLYYDgVYEPK 197 Salmonella enterica
5OED_A       203 SICGLYYDgVYEPK 216 Salmonella enterica
AAT12442     201 SICGLYYDgVYEPK 214 Salmonella enterica
AAT12437     201 SICGLYYDgVYEPK 214 Salmonella enterica
WP_079956080 201 SICGLYYDgVYEPK 214 Salmonella enterica
TYN63150     201 SICGLYYDgVYEPK 214 Salmonella enterica subsp. enterica serovar Typhimurium
KNT68522     169 SICGLYYDgVYEPK 182 Salmonella enterica subsp. enterica serovar 4,5,12:i-

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