1LVF,4J2C


Conserved Protein Domain Family
SNARE_NTD_STX6

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cd21447: SNARE_NTD_STX6 
N-terminal domain of syntaxin-6
Syntaxin-6 (STX6) is a component of a soluble NSF attachment protein receptor (SNARE) complex involved in intracellular vesicle trafficking and in the fusion of retrograde transport carriers with the trans-Golgi network (TGN). This model corresponds to N-terminal domain of STX6, which is a regulatory domain named Habc.
Statistics
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PSSM-Id: 410573
Aligned: 9 rows
Threshold Bit Score: 181.275
Created: 6-Feb-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LVF_A         5 DPFFVVKGEVQKAVNTAQGLFQRWTELLQgpsaatREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFnldatE 84  Norway rat
XP_005991137  81 PKEMVGKREVQKAVNTAQGLFQRWMELLQdpnaatKEEIDWTTNELRNSLRSIEWDLEDLDETISIVEANPRKFnldpiE 160 coelacanth
4J2C_A         5 DPFFVVKGEVQKAVNTAQGLFQRWTELLQdpstatREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFnldatE 84  human
O43752         5 DPFFVVKGEVQKAVNTAQGLFQRWTELLQdpstatREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFnldatE 84  human
Q5ZL19         5 DPFFVVKGEVQKAVNTAQGLFQRWTELLQdpsiatREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFnldatE 84  chicken
NP_001017879   5 DPFFVVKGEVQKAVNTAQGLHQRWIELLQdaggasKEEVDWTTNELRNSLRSIEWDLEDLDETISIVEANPKKFnldamE 84  zebrafish
XP_007901143   5 DPFFVVKGEVQKAVNNAQGLYQRWTELLEdpssasKEECDWTTNELRNSLRSIEWDLEDLDETISIVETNPRKFnldpaE 84  elephant shark
NP_001039240   5 DPFFVVRGEVQKAVNTAQGLFQRWTDLLQdpsistREELDWTTNELRNNLRSIEWDLEDLDETISIVESNPRKFsldpaE 84  tropical clawed...
XP_030853567   5 DPFFVVKEEVEKAVNTSEGLYQRWTQLLEdtnsvsKEEYDWTMNELRNSLRSIEWDVEDLEETISIVEANPRKFriepsD 84  purple sea urchin
1LVF_A        85 LSIRKAFITSTRQIVRDMKDQMS 107 Norway rat
XP_005991137 161 LSKRKAFITGTRQTVKEMKDQMS 183 coelacanth
4J2C_A        85 LSIRKAFITSTRQVVRDMKDQMS 107 human
O43752        85 LSIRKAFITSTRQVVRDMKDQMS 107 human
Q5ZL19        85 LGIRKSFITSTRQVVREMKDQMS 107 chicken
NP_001017879  85 LAKRKAFITSTRQTVREMKDHMT 107 zebrafish
XP_007901143  85 LSKRKAFITSTKQIVKDMKDHMS 107 elephant shark
NP_001039240  85 LRQRKAFISETRQCVKDMKDRMT 107 tropical clawed frog
XP_030853567  85 LDTRRLFVTRTKDRVREMKEHMS 107 purple sea urchin
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