5ED9


Conserved Protein Domain Family
SUN2_cc1

?
cd21438: SUN2_cc1 
coiled-coil domain 1 of SUN domain-containing protein 2 and similar proteins
SUN domain-containing protein 2 (SUN2), also called protein unc-84 homolog B, Rab5-interacting protein (Rab5IP), or Sad1/unc-84 protein-like 2, is a component of the LINC (LInker of Nucleoskeleton and Cytoskeleton) complex which is involved in the connection between the nuclear lamina and the cytoskeleton. Besides the core SUN domain, SUN2 contains two coiled-coil domains (CC1 and CC2), which act as the intrinsic dynamic regulators for controlling the activity of the SUN domain. This model corresponds to CC1 that functions as an activation segment to release CC2-mediated inhibition of the SUN domain.
Statistics
?
PSSM-Id: 410604
Aligned: 15 rows
Threshold Bit Score: 65.0229
Created: 18-Mar-2020
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
trimer
Conserved site includes 29 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface [polypeptide binding site]
Evidence:
  • Structure:5ED9; Mus musculus SUN domain-containing protein 2 forms a homotrimer, contacts at 4A
    View structure with Cn3D

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        #  ##  #  ##  ## ##  ## ##  ## ##  #  ##  #  ##  ## ###
5ED9_A        11 QEAFQESSVKELGRLEAQLASLRQELAALTLKQNSVADEVGLLPQKIQAARADVE 65  house mouse
OCT83121     357 TDNSNKNLMEVEGRLSSELLGIQEQLKAVRKTQTDLSQKVETFPKQIQGVRDGVE 411 African clawed frog
XP_018429622 299 QDSLRENFLQNLGKLETKLLHLQQELVSVRKTQGDVSQQMAAIPGQIKGVRDEVQ 353 Nanorana parkeri
XP_030066684 398 QEDQKENTLQDLSLLKEQLVSLRRELGAIMETQRGMSERMNSFTGQIRGMRDEVE 452 Microcaecilia unicolor
XP_020836181  67 QEGFVEKRPKQMGSLEAQLVGLRQELVALSQSQAEVEKELHLGPEKMVALRNEVE 121 koala
XP_020835730 515 QEDSQDKRPKEMASLEAQLAGLRQELAAISQRQAAMAQEIHLWREKMVALRSDME 569 koala
Q9UH99       400 QESFQESSVKELRRLEDQLAGLQQELAALALKQSSVAEEVGLLPQQIQAVRDDVE 454 human
GCF46899     405 QQSLMGDFQKSMGTLEAQLAGLKKEFATLAADQKTLTKHVESVPGQIKRVQEDPD 459 Paroedura picta
XP_027726887 415 QEALQENMLKELGPLEAQLAGLRQELAALSQRQAAMAEQVDLWPQKMAALRSDVE 469 common wombat
XP_028935020 449 QEALRASMLQELGRLEGQLADLRQELATLTLKQATVAEQVEGFPQKIQAVQDEVE 503 platypus

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap