3F1I


Conserved Protein Domain Family
GAT_STAM1

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cd21389: GAT_STAM1 
non-canonical GAT domain found in signal transducing adapter molecule 1 (STAM-1) and similar proteins
STAM-1 is involved in intracellular signal transduction mediated by cytokines and growth factors. It may also play a role in T-cell development. STAM-1 is a component of the ESCRT-0 complex that binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them for further sequential lysosomal sorting/trafficking processes. Members of this subfamily contain a non-canonical GAT (GGA and Tom1) domain consisting of two helices. A canonical GAT domain is a monomeric three-helix bundle that bind to ubiquitin. STAM-1, together with another GAT domain-containing protein Hrs, forms a Hrs/STAM1 core complex that consists of two intertwined GAT domains, each consisting of two helices from one subunit, and one from the other subunit. The two GAT domains are connected by a two-stranded coiled-coil. The Hrs/STAM1 complex, an intertwined GAT heterodimer, is a scaffold for binding of ubiquitinated cargo proteins and coordinating ubiquitination and deubiquitination reactions that regulate sorting.
Statistics
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PSSM-Id: 410594
Aligned: 7 rows
Threshold Bit Score: 127.418
Created: 6-Feb-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimer
Conserved site includes 46 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Comment:The STAM/Hrs complex is a GAT domain-based scaffold for ubiquitin-dependent sorting.
  • Structure:3F1I; Homo sapiens STAM1 in complex with Hrs, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # #  ## ##  #  # ## ## #   #   #  ##  ## ###### ### ## ######## ### ##  ## #
3F1I_S         1 FIDEDKMDQLLQMLQSTDPSDDQpDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE 77  human
XP_007887951 311 YIDEEKMDQLLQLLQSANPTDGQpDSPELLHLEGSCDQMGPLIDQKLEEIDRKHSELSELNVKVMEALSLYAKLMNE 387 elephant shark
NP_001084997 299 YIDEDKMDHLLQMLQSADPTDGLpDPADLLHLEAACHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSFYTKLMNE 375 African clawed frog
Q92783       301 FIDEDKMDQLLQMLQSTDPSDDQpDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE 377 human
XP_014349256 301 YIDEDKMDQLLQMLQSADPTDDQpDQPELLHLEGMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYAKLMNE 377 coelacanth
NP_956414    303 YIDEEKMDQLLQMIQSADPTDDQsDTCEHLQLEAACNQMGPLIDQKLEDTDRKHSELSELNVKVMEALSLYAKLMNE 379 zebrafish
XP_015137487 301 YIDEDKMDQLLQMLQSADPTDDQpDLPELLHLEAMCHQMGPLIDEKLKDIDRKHSELSELNVKAMEALSLYNKLMNE 377 chicken

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