3F1I


Conserved Protein Domain Family
GAT_STAM

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cd21388: GAT_STAM 
non-canonical GAT domain found in metazoan signal transducing adapter molecules (STAMs) and similar proteins
STAMs are Hrs-binding proteins involved in intracellular signal transduction mediated by cytokines and growth factors. They are components of the ESCRT-0 complex that binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them for further sequential lysosomal sorting/trafficking processes. Members of this family contain a non-canonical GAT (GGA and Tom1) domain consisting of two helices. A canonical GAT domain is a monomeric three-helix bundle that bind to ubiquitin. STAM, together with another GAT domain-containing protein Hrs, forms a Hrs/STAM core complex that consists of two intertwined GAT domains, each consisting of two helices from one subunit, and one from the other subunit. The two GAT domains are connected by a two-stranded coiled-coil. The Hrs/STAM complex, an intertwined GAT heterodimer, is a scaffold for binding of ubiquitinated cargo proteins and coordinating ubiquitination and deubiquitination reactions that regulate sorting.
Statistics
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PSSM-Id: 410593
Aligned: 13 rows
Threshold Bit Score: 102.384
Created: 6-Feb-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimer
Conserved site includes 42 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Comment:The STAM/Hrs complex is a GAT domain-based scaffold for ubiquitin-dependent sorting.
  • Structure:3F1I; Homo sapiens STAM1 in complex with Hrs, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # #  ## ##  #  # #      #   #   #  ##  ## ###### ### ## ######## ### ##  ##  
3F1I_S         1 FIDEDKMDQLLQMLQSTDPsdd-qpDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE 77  human
XP_029829526 293 CVDPAQIDDTLQRLHETDPasg-qpDPPDLLALEERCAGMGPLIEQELERIDRRHASLTAASRQLAEALALYHGLMRT 369 black-legged tick
XP_018653674 319 QLDEKKIDECLRLITTVDPtgefqqDPPELSQLEAECVAMVPLVDPELKLVDKEIIMLTELNQRLLDAFQLYHDIMSR 396 Schistosoma mansoni
XP_002739807 294 EIDEEKMDKALDLLQNADPtgderpDTQEMLSLEDQCKQIGPLIDTELEKIDRKHAQLTALTEKLRDAFALYHQLMKD 371 Saccoglossus kowa...
XP_011666599 316 KISTETMDQCLEMLQNADPtme-rpDNPDMPLLEATCNGMAPLIDQELESIDRDHADLTALNHRLMDAFQMYHDLMKE 392 purple sea urchin
XP_002117126 318 QIDEEKIDITLEIFGKADItv--naDTQELIDLEDTCNRMNYQVTNKLERLETKDQEVNTLKNQFEETLALYQKLMQE 393 Trichoplax adhaerens
XP_029640531 303 EVDEAKIDQVLALIQNADPtgetqpDSSELLSLEEQCKIMGPLIDAELERIDKKHANLVELNMKVMDALQMYHNLMKE 380 East Asian common...
NP_477448    337 EIDESKIDRLLHLLHEANPedp-sqDSDEMLQLEQEVHQMGPLIDAELERVDRKHAQLTQLSSDLVDAINLYHTLMRD 413 fruit fly
ELT97423     300 EIDEEKIDKTLAMIQNTDPtgermeDNPEMLLLEEQCKAMQPLIDSELEKIDKKHNNLMEINSKVVEALHMYHTLMRE 377 Capitella teleta
XP_019850252 313 EVNETQVDLLLDMLKNADIssenpeELKTLNELEAECKSMKPIAESNIEGYDKQLMDMNEVSEKLQQALSTYRRLLQE 390 Amphimedon queens...
O75886       291 YIDEDKMDRALQVLQSIDPtds-kpDSQDLLDLEDICQQMGPMIDEKLEEIDRKHSELSELNVKVLEALELYNKLVNE 367 human
XP_013413283 308 VIDESKMDECLDQLQNADPtgqnrpDTQEMLQLEEECRQMGPLIDQELEQIDRNHNMLMELNQKVCEALQMYNTLMNE 385 Lingula anatina
O01498       297 SINEAILVRCLQVLHECDPtge-rqDPEDLAQLEAASYAQGNLIDAHLASIDRQSNSLAQIDVAIRDVLALYDDAIQK 373 Caenorhabditis el...

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