Conserved Protein Domain Family
CH_IQGAP3

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cd21276: CH_IQGAP3 
calponin homology (CH) domain found in Ras GTPase-activating-like protein IQGAP3
IQ motif containing GTPase activating protein 3 (IQGAP3) associates with Ras GTP-binding proteins. It regulates the organization of the cytoskeleton under the regulation of Rac1 and Cdc42 in neuronal cells. The depletion of IQGAP3 is shown to impair neurite or axon outgrowth in neuronal cells with disorganized cytoskeleton. It belongs to the IQGAP family, which consists of multi-domain proteins having a calponin-homology (CH) domain which binds F-actin, IQGAP-specific repeats, a single WW domain, four IQ motifs that mediate interactions with calmodulin, and a RasGAP related domain that binds active Rho family GTPases. IQGAP3 contains a single copy of the CH domain at the N-terminus.
Statistics
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PSSM-Id: 409125
Aligned: 4 rows
Threshold Bit Score: 344.27
Created: 9-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative actin
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #   #                                                            # ##  #
Q86VI3         28 NVAYQYLCRLEEAKRWMEACLKEELPspvELEESLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYqatGLHFRHTDNIN 107  human
OPJ76154        8 NIAYQYLCRLEEAKRWMETCLSEELPpptELEETLRNGVVLAKLGHCFAPTVVPLKKIYDREQMRYkaaGLHFRHTDNIN 87   Patagioenas f...
OCA27248        8 NIAYQYLCHLEEAKRWMEACLNEELPpptELEESLRNGVTLAKLGSFFAPEIVPLKKIYDIEQMRYqatGLHFRHTDNIN 87   tropical claw...
NP_001295896   26 NVAYQYLCRLEEAKRWMEECLKEDLPaptELEEALRNGVYLAKLGHCFAPRVVPLKKIYDLDQQRYkvsGLQFRHTDNIN 105  zebrafish
Feature 1         # #         #########     # ## ##  ##  #                                
Q86VI3        108 FWLSAIAHIGLPSTFFPETTDIYDKKNMPRVVYCIHALSLFLFRLGlAPQIHDLYGKVKFTAEELSNMASEL 179  human
OPJ76154       88 YWRDAMSHVGLPSIFHPETTDIYDKKNMPRVVYCIHALSLYLFKLGlAPQIQDLYGKVDFTEEEITNMKREL 159  Patagioenas fasciata ...
OCA27248       88 HWRKAMCHIGLPMLFQPETTDIYDKKNMPRVVYCIHALSLYLFRLGlAPQIQDLYGKVNFTEEEINNMKCEL 159  tropical clawed frog
NP_001295896  106 HWRNAMMEVGLPTIFHPETTDVYDKKNMPRAVYCIHALSLYLFRLGlAPQIHDLRGKVKFTEEEINNMKLEL 177  zebrafish

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