4B7L,2WFN


Conserved Protein Domain Family
CH_FLN_rpt2

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cd21230: CH_FLN_rpt2 
second calponin homology (CH) domain found in filamins
The filamin family includes filamin-A (FLN-A), filamin-B (FLN-B) and filamin-C (FLN-C). Filamins function to anchor various transmembrane proteins to the actin cytoskeleton. FLN-A is also called actin-binding protein 280 (ABP-280), alpha-filamin, endothelial actin-binding protein, filamin-1, or non-muscle filamin. It promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. It also serves as a scaffold for a wide range of cytoplasmic signaling proteins. FLN-B is also called ABP-278, ABP-280 homolog, actin-binding-like protein, beta-filamin, filamin homolog 1 (Fh1), filamin-3, thyroid autoantigen, truncated actin-binding protein, or truncated ABP. It connects cell membrane constituents to the actin cytoskeleton and may also promote orthogonal branching of actin filaments as well as link actin filaments to membrane glycoproteins. FLN-C, also called FLNc, ABP-280-like protein, ABP-L, actin-binding-like protein, filamin-2, or gamma-filamin, is a muscle-specific filamin that plays a central role in muscle cells, probably by functioning as a large actin-cross-linking protein. It may be involved in reorganizing the actin cytoskeleton in response to signaling events, and may also display structural functions at the Z lines in muscle cells. FLN-C is critical for normal myogenesis and for maintaining the structural integrity of the muscle fibers. Members of this family contain two copies of the CH domain. The model corresponds to the second CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409079
Aligned: 14 rows
Threshold Bit Score: 186.434
Created: 16-Dec-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #   #                                                # ##  ## #        ########
4B7L_A        140 TPKQRLLGWIQNKIPylp-itNFNQNWQDGKALGALVDSCAPGLCpdweswdpqKPVDNAREAMQQADDWLGVPQVITPE 218  human
Q9VEN1        140 TPKQRLLNWIHAKIPdlp-inNFTNDWTTGKAVGALVDACAPGLCpdwelwdpkDAVQNASEAMGLADDWLNVRQLIKPE 218  fruit fly
CBN80647       15 TPKQRLLGWIQNKVPdmp-inNFSQDWRNGRALGALVDSCAPGLCpdwetwdpvKPVENATEAMQLADDWLGIPQVIAPE 93   European seabass
XP_011404797  136 SGKQALLEYIQKKIPqkn-ikNFTSDWNDGTAIAALVDAHAPGLCpdadtmdpnNSLQNASRAMQLADDWLGIPQVLGPE 214  Amphimedon qu...
PFX25116      209 TPKQALLAWVKSKMPesvpmdNFNKDWNDGRAVACLVDAVAPGLFpecedldpaDRVENAKKAMQAAEDWLGVPQVITPE 288  Stylophora pi...
RDD41359      176 SAKQALLNWVNDVLPkdykvnNFTRDWNDGIAIQALVDNIAPGLCpeyetanphNALENATVAMERASDCLDVPMVLTPE 255  Trichoplax sp...
XP_029657551   65 TPKERLLSWVTDKIElp--veNFTTHWNDGRAVGSLVDSFAPGLCpnwrywdgkKRLENVTEAMETAETWLSVPMLITPD 142  common octopus
CBY20797      190 TPKQRLLGWIQNKIPqip-itNFSRDWQDGRALGALVDNCAPGLCpdwe-ewgpDGQRNADEAMALAEKYLGVAKVIAPE 267  Oikopleura di...
KRZ62755      213 PPKQRLLDWLNSKIPgfh-ltNLTTQWSDGRPLGALVDSLAPGLCpewsmwkaaNALKNTTTAMDLAEKWLVIPKLIEPE 291  Trichinella n...
XP_002592554  154 TPKEKLLGFVQAKVPdlp-vkNFNKDWNDGKACGALVDACAPGLCpdwedwnpnDKVKNCEEAMDLADKWLGVPKLLSPE 232  Florida lancelet
Feature 1         #      # ## ##  ##  #   
4B7L_A        219 EIIHPdVDEHSVMTYLSQFPKAKL 242  human
Q9VEN1        219 ELVNPnVDEQSMMTYLSQYPNSKL 242  fruit fly
CBN80647       94 EIIDPsVDEQSVMTYLSQFPKAKL 117  European seabass
XP_011404797  215 DMTNPhVDELSMMTYLSQFPDAEL 238  Amphimedon queenslandica
PFX25116      289 EITNPkVDELSVMTYVSYFPEAKL 312  Stylophora pistillata
RDD41359      256 DMVNPkVDEKSVMTYVSFFPEAKL 279  Trichoplax sp. H2
XP_029657551  143 EIINPrVDEKSVMTYIAQFSGAEV 166  common octopus
CBY20797      268 EITNPhVDDQSVMTYLSQFPNAKL 291  Oikopleura dioica
KRZ62755      292 EFINPdVDEMSMMTYLSQYPNAKL 315  Trichinella nativa
XP_002592554  233 DMASPhVDDLSVMTYVSQFPQAKL 256  Florida lancelet

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