1WYP,1WYN


Conserved Protein Domain Family
CH_CNN

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cd21211: CH_CNN 
calponin homology (CH) domain found in the calponin family
Calponin is an actin filament-associated regulatory protein expressed in smooth muscle and many types of non-muscle cells. There are three calponin isoforms, calponin-1, -2, -3. All of them are actin-binding proteins with functions in inhibiting actin-activated myosin ATPase and stabilizing the actin cytoskeleton. Calponin-1 is specifically expressed in smooth muscle cells and plays a role in fine-tuning smooth muscle contractility. Calponin-2 is expressed in both smooth muscle and non-muscle cells and regulates multiple actin cytoskeleton-based functions. Calponin-3 is expressed in the brain and participates in actin cytoskeleton-based activities in embryonic development and myogenesis. Members of this family contain a single copy of the CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409060
Aligned: 3 rows
Threshold Bit Score: 223.34
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #   #                                                # ##  ## #         #####
1WYP_A     15 DHQREQELREWIEGVTGRRIGnNFMDGLKDGIILCEFINKLQPGSVKKINeSTQNWHQLENIGNFIKAITKYgvkPHDIF 94  human
1WYN_A     15 DPQKEAELRTWIEGLTGLSIGpDFQKGLKDGTILCTLMNKLQPGSVPKINrSMQNWHQLENLSNFIKAMVSYgmnPVDLF 94  human
6225157    25 DHQAEEDLRNWIEEVTGMSIGpNFQLGLKDGIILCELINKLQPGSVKKVNeSSLNWPQLENIGNFIKAIQAYgmkPHDIF 104 human
Feature 1     ####     # ## ##  ##  #     
1WYP_A     95 EANDLFEnTNHTQVQSTLLALASMAKTK 122 human
1WYN_A     95 EANDLFEsGNMTQVQVSLLALAGKAKTK 122 human
6225157   105 EANDLFEnGNMTQVQTTLVALAGLAKTK 132 human

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