1WYR,2L3G


Conserved Protein Domain Family
CH_PIX

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cd21202: CH_PIX 
calponin homology (CH) domain found in the Pak Interactive eXchange factor family
Pak Interactive eXchange factor (PIX) proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX family, alpha-PIX and beta-PIX. Alpha-PIX, also called Rho guanine nucleotide exchange factor 6 (ARHGEF6), is localized in dendritic spines where it regulates spine morphogenesis. It controls dendritic length and spine density in the hippocampus. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7), plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. Both alpha-PIX and beta-PIX contain a single copy of the CH domain at the N-terminus. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409051
Aligned: 4 rows
Threshold Bit Score: 177.724
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #   #                                                          # ##  ## #       
1WYR_A         7 GEEQIVTWLISLGVLESpkk-ticDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQtEADCINNINDFLKGCAt-- 83  human
2L3G_A        13 SAEQTVTWLITLGVLESpkk-tisDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRsESECLSNIREFLRGCGas- 90  human
XP_020902577   4 SAHHSLKWLASLGLVHDssgehgeNAERLLSEKLQNGNVLCHLVNVLKPXTVEKIXDTPTtEEEKLYNFESFQKACQelg 83  Exaiptasia pallida
RMX60726       4 KPREIGSWFDALGLLEQrqkaadhEFDSYLRDILKDGSILCRLVNRLKPGTINKIYQEPLsEEERLENFSSFLIACQdlq 83  Pocillopora dam...
Feature 1          #########     # ## ##  ##  #    
1WYR_A        84 -lQVEIFDPDDLysGVNFSKVLSTLLAVNKATES 116 human
2L3G_A        91 -lRLETFDANDLyqGQNFNKVLSSLVTLNKVTAD 123 human
XP_020902577  84 icAEEVPSIGELesPGNNQKLLQTLERLEKFAGG 117 Exaiptasia pallida
RMX60726      84 lkDNEIFTPNDLdsEEGFLRVLRTLDCLENVANG 117 Pocillopora damicornis

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