6D8C


Conserved Protein Domain Family
CH_FLN-like_rpt1

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cd21183: CH_FLN-like_rpt1 
first calponin homology (CH) domain found in the filamin family
The filamin family includes filamin-A (FLN-A), filamin-B (FLN-B) and filamin-C (FLN-C). Filamins function to anchor various transmembrane proteins to the actin cytoskeleton. FLN-A is also called actin-binding protein 280 (ABP-280), alpha-filamin, endothelial actin-binding protein, filamin-1, or non-muscle filamin. It promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. It also serves as a scaffold for a wide range of cytoplasmic signaling proteins. FLN-B is also called ABP-278, ABP-280 homolog, actin-binding-like protein, beta-filamin, filamin homolog 1 (Fh1), filamin-3, thyroid autoantigen, truncated actin-binding protein, or truncated ABP. It connects cell membrane constituents to the actin cytoskeleton and may also promote orthogonal branching of actin filaments as well as link actin filaments to membrane glycoproteins. FLN-C, also called FLNc, ABP-280-like protein, ABP-L, actin-binding-like protein, filamin-2, or gamma-filamin, is a muscle-specific filamin that plays a central role in muscle cells, probably by functioning as a large actin-cross-linking protein. It may be involved in reorganizing the actin cytoskeleton in response to signaling events, and may also display structural functions at the Z lines in muscle cells. FLN-C is critical for normal myogenesis and for maintaining the structural integrity of the muscle fibers. This family also includes Drosophila melanogaster protein jitterbug (Jbug), which is an actin-meshwork organizing protein containing three copies of the CH domain. Other members of this family contain two copies of the CH domain. This model corresponds to the first CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409032
Aligned: 4 rows
Threshold Bit Score: 195.392
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
actin binding
Conserved site includes 30 residues -Click on image for an interactive view with Cn3D
Feature 1:actin binding site [polypeptide binding site]
Evidence:
  • Structure:6D8C; Homo sapiens filamin-A binds F-actin, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ##  #   #                                                 #### ##  ## #         
6D8C_D         69 WKKIQQNTFTRWCNEHLKcvskriaNLQTDLSDGLRLIALLEVLSQKKmhrkhnqRPTFRQMQLENVSVALEFLDre-sI 147  human
NP_726235      57 WVEIQANTFRNWVNEHLRetgmqvhDWATDFCDGTCLCALVENLQTRPlkpswnrRPANQHHYLENATTALKSIEad-hI 135  fruit fly
XP_003385899   18 WKRIQEKTFTRWCNEQLKyreivlsDLAEGLSNGVNLIHLLELLSTKQlgr-ynkKPRVHAQRMENVDMALNFITktekI 96   Amphimedon qu...
RDD41359       24 WKRIQKNTFTRWCNQHLKtrnlqinDLFKDFADGLKLIALLEILSGRIikg-yhrKISFPQHKIENVSTALRFVEsl-gI 101  Trichoplax sp...
Feature 1         #########    # ## ##  ##  #  
6D8C_D        148 KLVSIDSKAIVDGNLKLILGLIWTLILHY 176  human
NP_726235     136 KLVNIGNVDIVNGNIKLILGLIWSLIVRY 164  fruit fly
XP_003385899   97 RLVNIGSGDIVGGNKKLILGLIWTLILHY 125  Amphimedon queenslandica
RDD41359      102 SLISIDSGHIIHGNSKLILGLIWKLILHF 130  Trichoplax sp. H2

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