6IBH


Conserved Protein Domain Family
LPMO_auxiliary-like

?
cd21176: LPMO_auxiliary-like 
fungal lytic polysaccharide monooxygenase (LPMO) auxiliary activity family protein
Proteins in this fungal family of copper-binding proteins may not function as lytic polysaccharide monooxygenases (LPMOs) or in specific binding of chitin and/or cellulose. A family member found in the ectomycorrhizal fungus Laccaria bicolor has been found to be located at the interface between tree rootlet cells and fungal hyphae. It does not perform oxidative cleavage of polysaccharides. Members of this family are related to LPMOs but have diverged to biological functions other than polysaccharide degradation.
Statistics
?
PSSM-Id: 410623
Aligned: 157 rows
Threshold Bit Score: 84.6138
Created: 21-Jan-2020
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
Cu binding site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Cu binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[EH] [DHE] [NDEH]Click to see conserved feature residue pattern help
Evidence:
  • Structure:6IBH: copper binding protein from Laetisaria arvalis (LaX325) binds copper

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        #                                                          #                    
6IBH_A         1 HFQLQWPGARgafv--------andeVYFCGAhnn---vtTNRTDFPLdgSGFVSIKSGHa----PYTVGAIISletdad 65   Laetisaria arv...
PMD47214      25 HTQIWYPPWRnnsfnt-----pfsqqIYPCAGiid--tpdTNRTLWPLt-GGSLNVTLHDg----AAIIFVNLGlgvnv- 91   Hyaloscypha va...
XP_965566     19 HFNLEYPVWRantlesg---tnysqwNYPCAGvppatstsGNRTDWPLk-GGSVKLDLHHp----WEYLFINLGlgan-- 88   Neurospora cra...
CRK10090      18 HYSVLYPDWRadtledte-etgysqwTWPCGGvey---gsGNRTDWPLa-NGSIAFQLGHa----FNYAFINVGledptt 88   Verticillium l...
XP_028467397  67 HFTLKYPEWRgntfddt---lnytqwSWPCGGpay---gsGNRTDWPLs-GGSLGVTLGHa----YNFLYINLGieengt 135  Sodiomyces alk...
XP_016209191  18 HFRLSYPYWRgdsfae-----grsqwSWPCANvsqe-nssTNRTQWPLe-GGSLVYSSSHe----WVQTYVNLGlgde-- 84   Verruconis gal...
TGJ62406      18 HFVITYPPDRgnsy--------ntqfQFPCGGle----stGNRSYWPTn-GGAMAFVPLHd----FAFTTINIAigdkiq 80   Arthrobotrys o...
OCT50285     738 HFELTYPTWRgdsflp-----pasqyMFPCANvnttdasnNNRTLWPLd-GGSLKIEFHHp----WTYVAINLGlgsn-- 805  Cladophialopho...
TLD33085      28 HHVITYPGTRgnnllsnvtfpfgmqwSYPCGGlp----ptTNRSFYPLt-GGAFAVQPGWfrghsESLWYINLCleaepl 102  Pyricularia sp...
KAB5578048    17 HIVFTYPGTRgnnlitnetfpyamqwTYPCGGln----vtQNRTYFPTs-GGTIAFQPGWfvghaKGFLHVNLGygtdgp 91   Coniochaeta sp...
Feature 1                                                                       #        
6IBH_A        66 awe--dfknssggDQIAIAYRQVDn--SGTYCVPFNPSslni-agiqDGANATIQVVYTGg--DGNLYQCAD 130  Laetisaria arvalis
PMD47214      92 ---------tnfnISLLAIPLNETg--AGNLCFPQLVLpsgl--piqEGTQASIQFATSNpknGEGLYNCAD 150  Hyaloscypha variabilis F
XP_965566     89 ---------vtnfNYTLTGPTFWNvsgAGTLCVDLPLPegl---tmsDGQEGSIQVVTVGa-sGSALYNCAD 147  Neurospora crassa OR74A
CRK10090      89 -------gnitsfNISLTPQLTNTs-gHGTLCLDGLTLptdl--nieDGTNASIQTIMVGp-sGQAQYNCAD 149  Verticillium longisporum
XP_028467397 136 --------vasfpTSLTPNPLNTTg--SGTLCLSDLLVpsdl--nitAGTNASLQVIKVGr-sGQAQYNCAD 194  Sodiomyces alkalinus F11
XP_016209191  85 ---------vtgfNVSLIAAWNATg--NGTVCFPHIGAaelarlnltEGQTASLQVVNVNa-kGNALYNCAD 144  Verruconis gallopava
TGJ62406      81 e-----ttdvnrwNHIMVPTFNQTg-gNGTFCLPLIKIppslkplvkAGVNATIQIVQLVa-sGSALYNCAD 145  Arthrobotrys oligospora
OCT50285     806 ---------tntfNISLNPMLLNEt-gNGTMCFPKWQLpadl--gieDGTDASLQIITIGd-sGTALYNCAD 864  Cladophialophora carri...
TLD33085     103 nc----slpitsvFRVRGPAGDNPf--PGTFCLPHLPLpagl--glkAGDKASIQAVQTHv-hGAPAYSCAD 165  Pyricularia sp. CBS 13...
KAB5578048    92 dggplhmdvplvpRFTILGPSNNPw--PGTLCLPDVSIpada--pvkAGDNVTLQISLVAq-hGAALFSCAD 158  Coniochaeta sp. 2T2.1

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap