5KMX,5KLH


Conserved Protein Domain Family
TbPSSA-2-like

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cd21131: TbPSSA-2-like 
ectodomain of Trypanosoma, including T. brucei Procyclic-Specific Surface Antigen-2 (TbPSSA-2), T. congolense Insect Stage Antigen (TcISA), and similar proteins
This family includes the ectodomains of Trypanosoma brucei Procyclic-Specific Surface Antigen-2 (TbPSSA-2) and homolog T. congolense Insect Stage Antigen (TcISA). Trypanosomal parasites transmit disease through the arthropod vector Glossina spp (the tsetse fly). Studies have shown that TbPSSA-2 plays an important role in parasite survival in the tsetse; TbPSSA-2 knock-out reduced the efficiency of trypanosome migration from the tsetse midgut to the salivary glands. The TbPSSA-2 and TcISA ectodomains adopt a novel architecture, having two lobes connected by a loop, exhibiting conformational flexibility. The inter-lobe hinge region displaying rotational flexibility suggests a potential mechanism for coordinating a binding partner.
Statistics
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PSSM-Id: 412055
Aligned: 7 rows
Threshold Bit Score: 350.683
Created: 23-Dec-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:hinge region has peptide ligand binding potential

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
5KMX_A        11 RDDFKEAVNAfNPNPIEKWTGRFntENASVRRRTLNVpgfKSIPTVYTEATLPlnkdvtdgRLTVVVNIntVQPFTRRTP 90  Trypanosoma con...
5KLH_A        11 RDNFKKAVSAfDPKPLESWTGTFsdVKATVRRQSLSVaglGSIPSVYTEATVPvsgntdgsQLVVKVNIntVAPFTRRSP 90  Trypanosoma brucei
AAA30244      45 RDNFKKAVSAfDPKPLESWTGTFsdVKATVRRQSLSVaglGSIPSVYTEATVPvsgntdgsQLVVKVNIntVAPFTRRSP 124
CCC52044      45 ENEFKEALKAfNPESVSHWSGFIngHNASLRRGSLNVpgySGVPTRYVTASVVyppv-gakNLRVEVDIrsVERFSRSVP 123
EKF32541      45 RKAFSDDVKEfNPTPLNAWTGTIndVPITVRRESLNVqgvDGAISVFAEAVVSvpqr-sssRFPVSVNVntVASFVRKAP 123
ESL09843      44 KKAFTEAVKEfDPTFINAWTGKIndAPITVRRESLNVqgvTGATSVFAEAVIPvessrslgVISISVNVfnVTPFSRRAA 123
XP_011778523  45 RDNFKKAVSAfDPKPLESWTGTFsdVKATVRRQSLSVagfGPIPSVYTEATVPvsgntdgsQLVVKVNIntVAPFTRRSP 124
Feature 1             ##                                                     ##                  
5KMX_A        91 lRVKREKWYTCSSSQCsgs-sskCDCHRKHDEFRNKCIsegGRYTTESSKCrlgEKCGYCKQNVYLaTLYLVAGSvggGM 169 Trypanosoma con...
5KLH_A        91 lHATRERWFSCSSSQCsgy-srkCDCQEKHEQFRNKCYsqgGQYSTQSSKCrlgEKCGYCKQEVYLsKLYLVAASdgkGE 169 Trypanosoma brucei
AAA30244     125 lHATRERWFSCSSSQCsgy-srkCDCQEKHEQFRNKCYsqgGQYSTQSSKCrlgEKCGYCKQEVYLsKLYLVAASdgkGE 203
CCC52044     124 lAVRSEKTYSCYSSDCdkyssskCRCTKENDKFRRKCEangGKYSPTVTDCslgHQCSTCTQRVYLnTVYLVAEDignGK 203
EKF32541     124 fRAIKKTSYTCTSSDCrsr--lnCRCNELLNSFMDQCMasgGRFVRTSGMCvldRTCGTCERTVYLrRLYLVVSEvgnGK 201
ESL09843     124 lQTTRKSVFDCSSTSCrag--ksCRCDREAREFQDKCIamkGVFDAYPSWCrsgHKCGQCTTAIYLsRLYLVVQEvskGH 201
XP_011778523 125 lHATRERWFSCSSSQCsgy-srkCDCQEKHEQFRNKCYsqgGQYTTQTSKCrlgEKCGYCKQEVYLsKLYLVAASdgkGE 203
Feature 1                                                         
5KMX_A       170 YRESDkyqsalypfydiSQGYEPrqpsSVNVRLYSegDPFIAFQQLTEG 218 Trypanosoma congolense IL3000
5KLH_A       170 YRESTqyqsalysfghlSQGYEAvpqdKVQVQLYSegDPFIALERETMG 218 Trypanosoma brucei
AAA30244     204 YRESTqyqsalysfghlSQGYEAvpqdKVQVQLYSegDPFIALERETMG 252
CCC52044     204 FRESSryasat-hpmgsRSGYSSrrgdTIEVRLYSdkDPLVALEHLTHG 251
EKF32541     202 YVEDTklrsamypfgdlDNDYQPgipsTVTVRLYSskDPYIALQRLTRG 250
ESL09843     202 YAEDTalqsakyafgamDNDYQPtmpsEVAVRLYSnkDPYIALQRETSG 250
XP_011778523 204 YRESTqyqsalysfghlSQGYEAvpqdKVQVQLYSegDPFIALERETMG 252

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