4NOL,4D3Y,4D3Z,4NOK,4FGU,5NIJ


Conserved Protein Domain Family
legumain_C

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cd21115: legumain_C 
C-terminal prodomain of legumain
This family contains the C-terminal propeptide of legumain, a lysosomal endopeptidase with a specificity for hydrolysis of asparaginyl bonds. Legumain (also called vacuolar processing enzyme or VPE in plants, and asparaginyl endopeptidase or AEP in animals) is synthesized as a precursor with both N- and C-terminal propeptides. Prolegumain is directed to the lysosome or plant vacuole, where activation occurs at least partially by autolysis. The N-terminal catalytic domain is a cysteine protease from the C13 family. The C-terminal prodomain can be organized into an activation peptide (AP), spanning a helical region, and a C-terminal death domain-like fold, denoted as legumain stabilization and activity modulation (LSAM) domain. The C-terminal prodomain binds over the active site and inhibits the catalytic domain. During activation, the C-terminal prodomain is autocatalytically cleaved. This process is induced by pH changes. Human legumain has been shown to process the tetanus toxin generating the fragments found in class II antigen presentation. Legumain from plant seeds is thought to be responsible for the post-translational processing of seed proteins prior to storage. Legumain is highly expressed in some cancers such as colorectal cancer (CRC) and uveal melanoma (UM); it is associated with poor outcome in CRC and upregulation of legumain is associated with malignant behavior of UM. Thus, legumain may be used as a negative prognostic factor as well as a therapeutic target.
Statistics
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PSSM-Id: 411051
Aligned: 188 rows
Threshold Bit Score: 58.0708
Created: 23-Dec-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic domain interface [polypeptide binding site]
Evidence:
  • Comment:the C-terminal prodomain binds over the active site and inhibits the N-terminal catalytic domain
  • Structure:5NIJ: Arabidopsis thaliana vacuolar-processing enzyme (VPE) gamma-isozyme C-terminal prodomain interactions with N-terminal catalytic domain; contacts at 4.0A
    View structure with Cn3D
  • Structure:4FGU: Homo sapiens legumain C-terminal prodomain interacts with N-terminal catalytic domain; contacts at 4.0A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ## ### ##  #                                                                 # 
4NOL_A       311 DVPLTILKRKLLRtnd-vkeSQNLIGQIQQFLDAR-------------HVIEKSVHKIVSLLAgf---gETAERHLSERt 373 house mouse
5NIJ_A       316 DADLVHFWEKYRKapegsarKTEAQKQVLEAMSHR-------------LHIDNSVILVGKILFg----iSRGPEVLNKVr 378 thale cress
XP_004349412 327 DVDLETHRRRLAAast-ddeRRQAEMDLTAQQARR-------------EFITSTIHAVTARVAg----vQAKDALVASRf 388 Capsaspora owcz...
TYZ59953     335 DIDLVLAFYKYLRaps-gpaRRALADSLVDRVRAR-------------ESDDAVFEKIRTLYAa-----RTNQALLEPTs 395 Pythium brassicum
XP_005846964 314 EADLVPLYHRYQTaee-gpaKAEARRHLEAEASGRhagralaawwprqHPLHPAELGAALLALs-----LTAASFLPRPa 387 Chlorella varia...
AAQ93040     291 VAALEYLQRRLKEtts-keeANAIKGQIEHEVQRR-------------ARSDKIFDGITRRIVsn--glPVGTKFVNYI- 353 Trichomonas vag...
PON55741      35 EVNLHYLRNEVKRsrpgtpeYVEAKKELDETLAQI-------------KHEDDSFAGIGKLLLiq---nKTSSRLLKNNv 98  Parasponia ande...
PON35351     345 EHELDYYRNRVKRsrpdspnYARYKKELDERLAQR-------------KLEDDNFAGIRKLLFkde-tgSKVKNVVNEVq 410 Parasponia ande...
RAW36286     334 DVDLVVEFYRYLRaap-skdRRGLADELIATIQAR-------------EAADEVFETIKALFEq-----QTAAPLLQVEe 394 Phytophthora ca...
OHS98871     297 IVFLSILKRKLKKssd-eneKKRLTKAINNEQIKR-------------KKSDESYQTLLSQMMpnkkskSNTAKSLKTQi 362 Tritrichomonas ...
Feature 1                 ## ##  #   #     #               #  ## ##                       
4NOL_A       374 m-----ltAHDCYQEAVTHFRTHCFNWhsv----------tyEHALRYLYVLANLCEapypiDRIEMAMDKVC 431 house mouse
5NIJ_A       379 sagqplvdDWNCLKNQVRAFERHCGSLs--------------QYGIKHMRSFANICNagiqmEQMEEAASQAC 437 thale cress
XP_004349412 389 a-----vnDFDCYKASVAAYERVCGRFg--------------SFGMQYMYILANLCEsgytaDQVSAAAQYVC 442 Capsaspora owczarzaki ...
TYZ59953     396 e-----pqDFECHEQAWRAFEARCGRAagrhggdpdigrgftSYSLKYAGVLVDLCEngvsaAQIDAILKDAC 463 Pythium brassicum
XP_005846964 388 gaa--lvdDWDCLRGMVGAWEGACGRLd--------------QYGMRHTRAFANLCNaglqpAALGASARDAC 444 Chlorella variabilis
AAQ93040     354 --------DYDCYRTAIEGFRTYCGEId--------------ENELAKMNIFTHLCErt-dkKTILEDIKKEC 403 Trichomonas vaginalis
PON55741      99 nnp--kyaGNDCFTSLMDIYWKYCGSIl--------------EDGLKHATDIYNMCDagvteEELMAASTQVC 155 Parasponia andersonii
PON35351     411 --------RNNCFKSLMDIYWKNCGSIs--------------EYGMRLAKEFDKMCDagvtdDEFMAASTQVC 461 Parasponia andersonii
RAW36286     395 p------kNFECHEEITRTFETSCSFTgg-----------itSYSLKYVGTLMDICEaslsqDELVSIVRKAC 450 Phytophthora cactorum
OHS98871     363 -------lDWKCYKEAVIGAEKLTGPYk--------------EYSYKNLWAFAKLCNhyhnsETILNNFKKII 414 Tritrichomonas foetus

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