6PFJ


Conserved Protein Domain Family
RsiG

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cd21107: RsiG 
anti-sigma factor RsiG (AmfC)
RsiG is an anti-sigma factor that binds and sequesters the sporulation-specific sigma factor WhiG in a fashion dependent on 3',5'-cyclic diguanylic acid (c-di-GMP). RsiG can bind the cyclic dinucleotide in the absence of sigma factor WhiG, and does so in a specific manner via a unique signature conserved in all Streptomyces. This gene was originally named amfC (aerial mycelium formation protein) but no specific role was established, and was later renamed rsiG (regulator of sigma WhiG).
Links
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Statistics
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PSSM-Id: 411048
Aligned: 105 rows
Threshold Bit Score: 104.895
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:c-di-GMP binding site [chemical binding site]
Evidence:
  • Structure:6PFJ: Streptomyces venezuelae RsiG/WhiG heterodimer binds a dimer of 3',5'-cyclic diguanylic acid, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #  ##  #  ##  #  ##  #                              ####    ##  #  #
6PFJ_T     26 RLPELRTLRREAQSDEADLSYVRRMLQGRIDILRAELARRtd-----gEAPVLDRLSEIL---ADVPSr--hRSSAR-HV 94  Streptomyces venez...
KGA12169    8 TLAEIRAQRNALNMEEDAISYVRRLAQGRLDLVQDEERRRas-----gADAPVGSLAERL---ADVFGqqhgGGSAR-PP 78  actinobacterium ac...
TEX48381   14 PLDQLRAERDRLRHEEDAVSFVRRLAQGRIDLVEAVRHRK--------SSGESTSVADII---RSGVGpapsTGSAR-PP 81  Acidimicrobiales b...
GDX29005    8 SLSDLRARRSALQRQEDAVSFVRRLTQGRIDLVHDEERRRatna-pvpSGTLTERLANVFgqeHGGGS----ARPPR-ET 81  Actinobacteria bac...
KRO57997    9 SLDELRAKRAEMQHQEDAISFVRRLAQGRLDIARDELRRRidn---epLLDVATNLAGVF---GQEHG----GGSAR-PP 77  Acidimicrobiia bac...
GDX18969   11 STAELRSARAALQMQEDVISFVRRMAQGRCDLARDEQRRRtdg--tpaSGMSVVDIANVF---GQEHG----GGSSR-PP 80  Actinobacteria bac...
TML93372   22 SIEEIRAMRAESQAVETGLSYVRRLAQGRLDIVAADLRRRreggdapdLHSLVEHLPEIL---GERVHa---PGVGR-LP 94  Actinobacteria bac...
TML13654   21 PITDIRSMRAEGQSIENGLSYVRRVAQGRIDIVAAELQRRrdggdpadLSDLVARLPDIL---ADRHRs---GGPVRaPH 94  Actinobacteria bac...
TML63228   22 PIEEIRALRAECQQLEVDQSYLRRLIQGRLDIVRSEQARRvggagpsdVSDIVEHLPEIL---ADRVHa---PGVGR-LP 94  Actinobacteria bac...
TRZ82888   11 STEELRVARAALQMQEDVISFVRRMAQGRCDLARDEQRRRvdg--tpaSGISVSDIANVF---SQEHG----GGSSR-PP 80  Actinobacteria bac...
Feature 1                                                     ##  #  #   #  ##              
6PFJ_T     95 TLSTPRg----eEYRRLAAEMLSEVELSDLTArtDEELHAAMGRLAGYEQQISRRRHHLQRTADDCSAEIARRYREGE 168 Streptomyces venezue...
KGA12169   79 RETNVAgd---hPLVKELDELCEHYQFESLENidDRALSDLAGALGMFEKSCSQQRHDLFERIDALTAALVARVRESG 153 actinobacterium acAcidi
TEX48381   82 RDTDVAad---hPLVTEFDQLCDRLGFDEMSEldVPGLDRLHDGLVAFEAVQSSRRRDLFERIDALTAELVRRYRDGD 156 Acidimicrobiales bac...
GDX29005   82 DVPADH------PLLVQLDELCEEFSFENLESltDTDLRSLRDALTMFEQSCSQQRHQMFEQIDALTAELVARLRDGG 153 Actinobacteria bacte...
KRO57997   78 RETIISgd---hPLVLELEHLCEDLGFGSIRTldETSLRTAIDELAKFELLRSSERRSLFDTIDALTAALVKRYKSGG 152 Acidimicrobiia bacte...
GDX18969   81 RETNISae---hELVVELEKLCERVGFGELRTldDDALESAIAEIEKFELARSAERKNLFAKIDSLTSELVKRYKDGG 155 Actinobacteria bacte...
TML93372   95 TLMAPRddevtrQLTSRLDAIVDANTLGALEQldDDEALALTNQLADLERQVSERRQALFTRIDALQAELTRRYKTGE 172 Actinobacteria bacte...
TML13654   95 EITVDRva---dELLDDLDAILGPGAISDLTHrdEADLAATRDALTDFERRLSATRRSIHDTLDTLQAELTRRYRTGE 169 Actinobacteria bacte...
TML63228   95 TYLSPSed---aGLTSELDAVFRSLGPIDRLA--DHQVDDLATALADLELTVSARRRSLHERIDALQSELTRRYKTGE 167 Actinobacteria bacte...
TRZ82888   81 REPNISte---hPLVVELEKICQEISFGEMRTldDQSLETVVERLSSFESSQSVERKTLFTSIDALTTELVKRYKDGG 155 Actinobacteria bacte...

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